Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00095 ATGATGAAAGTTGGATTTGGTGAAGTACTTCATGCAAATTCAAACATGATTCATCCTCACATGCATGAAACTTGGGATTACACAATCATTACAAATGACTTATTTCCACCGCCAATCCAAACAAATCCTTATCCAAAGTCATTAACGGAAAACCACTCCCTAAACTTAGAACAAAATGAGGTATGTGATTGGATGGAACACATTACTAATAAGCACTTTATTGAAGACTTACCACAAAACAACAATCATATTTATAATCTTCACATTCAAACAAACACATTAGATTTAGTTCACAATAACCATAATGATCATATTCATCATTATGAATGTGATAAAGAGTTGAATTTGATAACCCTTTTGATGGAATGTGCAGTAGCAATCTCTGTTGAAAATCTTAGTGAAGCTCACAAAATGTTACTAGAGTTAACACAAGTTGCTTCACCCTACAAAACATCATGTGGTGAACGAGTTGTTGCTTATTTTGCAAAAGCAATGATAAGTAGGGTGATGAATTCATGGATTGGAGTATGTTCCCCTTTGATTGATCACAAAACAATTCACTCATCATTCCAAGTTTTCAACAATGTTTCACCTTTCATCAAATTTGCACACTTCACTTCAAACCAAGCGATACTCGAAGCAGTTAACCGTTGCAACAACATTCACATAATTGATTTGGACATCATGCAAGGTCTTCAATGGCCAGCTTTTTTCCATATACTCGCGACTCGAATCGAGGGTCGGCCCTCAATTCGAATGACGGGTCTGGGTGCATCAATGGAACTTTTAGTCGAGACAGGAAAACAACTCTCCAATTTCGCAAGAAGACTTGGTTTGTGCTTAGAATTTTATCCTATTGCGAGAAAATTTGGTGAAATTGTTGATTTTTCGACTTTGCAAATTAGGCCTAATGAAACACTAGCTGTGCATTGGTTACAACATTCTTTATATGATGCAATTGGACCTGATTGGAAAAGTTTGAAACTTCTTGAGGAATTGGAACCAAAAATCATAACTTTAGTAGAACAAGATGTTAACATTGGAGGGTCATTCTTAGACCGTTTTGTTGGTTCATTGCATTACTACTCTACACTTTTTGATTCTCTTGGAGCTTATTTGCATAGTGATGATACAAATAGGAACAATATTGAACATGGTATTCTATCTAAAGAGATCAATAATATTTTGGCTATAGGTGGACCTAAGAGGAGTGGTGAAGAAAAGTTTAGGCTTTGGAGAAATGAACTTGCAAGAAATATTTTTGAGCAAGTTCCAATGAGTGATAATTCAATGGCACAAGCACAATTGATATTGAACATGTTCTCACCAGGTCATGGTTATAGTGTTGCTCAAGTTGATGGTACATTAAGGCTTGGTTGGAAAGATACCAGTTTGTATACAGCTTCTGCTTGGACTTCTAGAAGTTCTAGGTAG 1434 0.3584 MMKVGFGEVLHANSNMIHPHMHETWDYTIITNDLFPPPIQTNPYPKSLTENHSLNLEQNEVCDWMEHITNKHFIEDLPQNNNHIYNLHIQTNTLDLVHNNHNDHIHHYECDKELNLITLLMECAVAISVENLSEAHKMLLELTQVASPYKTSCGERVVAYFAKAMISRVMNSWIGVCSPLIDHKTIHSSFQVFNNVSPFIKFAHFTSNQAILEAVNRCNNIHIIDLDIMQGLQWPAFFHILATRIEGRPSIRMTGLGASMELLVETGKQLSNFARRLGLCLEFYPIARKFGEIVDFSTLQIRPNETLAVHWLQHSLYDAIGPDWKSLKLLEELEPKIITLVEQDVNIGGSFLDRFVGSLHYYSTLFDSLGAYLHSDDTNRNNIEHGILSKEINNILAIGGPKRSGEEKFRLWRNELARNIFEQVPMSDNSMAQAQLILNMFSPGHGYSVAQVDGTLRLGWKDTSLYTASAWTSRSSR 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00095 477 Pfam GRAS domain family 116 472 IPR005202 -
Car04g00095 477 ProSiteProfiles GRAS family profile. 107 472 IPR005202 -
Car04g00095 477 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 473 IPR005202 -
Car04g00095 477 PANTHER OS05G0485400 PROTEIN 15 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00095 Car-Chr4 940074 941788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00095 89 475 GRAS Transcription Factor Family AT3G54220 50.761 8.62e-133 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car04g00095 GRAS 2.4e-101 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00095 - - cam:101494668 971.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00095 04 940074 941788 Car04g00095 04 940074 941788 ECH