Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00094 ATGGATCATGTGATTGGTGGAAAGTTTAAACTTGGAAGGAAAATTGGGAGTGGCTCTTTTGGGGAGCTCTATTTAGCTGTTAATATACAAACTGGAGAGGAGGTGGCTGTTAAGCTGGAACCTGTGAAGACTAGGCATCCACAGCTTCACTATGAATCAAAATTGTATATGCTTCTTCAAGGAGGAACTGGGGTTCCCCACCTCAAATGGTTTGGAGTTGAGGGAGAGTACAATGTCATGGCTATCGACCTTCTTGGACCAAGTTTGGAAGACTTATTCAATTATTGTAACCGGAAATTCACATTGAAGTCCGTGTTAATGCTTGCTGATCAATTGATTAACCGAGTTGAATACATGCATTCAAGAGGTTTTCTTCACCGCGACATAAAGCCGGACAATTTTTTGATGGGCCTAGGACGTAAAGCAAATCAAGTGTACATCATTGACTATGGCCTTGCGAAAAAATATAGGGATCTTCAGACTCATAGGCACATACCATACAGGGAGAACAAGAACCTTACAGGCACAGCGCGCTATGCAAGTGTCAACACTCATCTTGGAATCGAACAAAGCAGAAGGGATGATCTGGAATCTCTAGGTTATGTGCTCATGTATTTCATAAAAGGAAGTCTTCCCTGGCAGGGACTAAAGGCTGGAACGAAAAAACAAAAATATGACAAAATTAGTGAGACGAAGGTTTCAACTCCCGTAGAGGTGCTCTGCAAATCATATCCTTCTGAGTTTGTATCATACTTCCACTATTGCCGATCTTTGAGGTTCGAGGACAAGCCAGATTATTCATATTTGAAGAGACTTTTCCGAGACCTATTTATTCGAGAAGGCTATCAATTTGACTATGTTTTTGACTGGACTGTATTGAAGTATCCACAGGTCAGTAACAATGGCAGTGGCAGCTCTAGAGGGCGGTATGGCACTGGCAAGGCAGCTATGCATACAGGTCCACCGGCGCAAAAACCAGAAAAGATCCCAGTCGGGAGGGAGATTCGAGAGAAATTATCTGGTGGTGTTGAAGCATTCACCCAGAGGAACCGCCCAGGTTCTAGTCCTCTTGGTGAACACACCAGACATAGGACTTTTGAGGATGTGCCAATGCATAAGGATATGCACTATGCGCAACACAATGCTACTCGATATGGCAGCACTTCAAGAAGAGCCATGGCCTCATCAAACAAGCCAAATACTTCAGGTGACCATACCGGCAGGATGACCACAAGTGGGAACCGACCATCTGCCGCACATAGAATTCAACCAATGTATGACACCAAACAAGCAACTTTCGCACGCAATGGGTCACTGAGAGGCAACCGCGATGATCCTCTGAGGAACTTTGAACTCCTCACTATCAGGAAGTAA 1374 0.4432 MDHVIGGKFKLGRKIGSGSFGELYLAVNIQTGEEVAVKLEPVKTRHPQLHYESKLYMLLQGGTGVPHLKWFGVEGEYNVMAIDLLGPSLEDLFNYCNRKFTLKSVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFIKGSLPWQGLKAGTKKQKYDKISETKVSTPVEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTVLKYPQVSNNGSGSSRGRYGTGKAAMHTGPPAQKPEKIPVGREIREKLSGGVEAFTQRNRPGSSPLGEHTRHRTFEDVPMHKDMHYAQHNATRYGSTSRRAMASSNKPNTSGDHTGRMTTSGNRPSAAHRIQPMYDTKQATFARNGSLRGNRDDPLRNFELLTIRK 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00094 457 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 442 - -
Car04g00094 457 MobiDBLite consensus disorder prediction 384 418 - -
Car04g00094 457 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00094 457 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00094 457 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Car04g00094 457 PANTHER CASEIN KINASE-RELATED 1 442 - -
Car04g00094 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Car04g00094 457 Gene3D Transferase(Phosphotransferase) domain 1 1 321 - -
Car04g00094 457 MobiDBLite consensus disorder prediction 301 327 - -
Car04g00094 457 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Car04g00094 457 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00094 457 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00094 Car-Chr4 928675 933782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00094 8 213 MAP Kinase Kinase Kinase AT3G06030 25.463 5.21e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Car04g00094 Pkinase 6.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00094 K08960 - gmx:100789031 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00094 04 928675 933782 Car04g00094 04 928675 933782 ECH
Car03g02339 03 69316187 69322098 Car04g00094 04 928675 933782 PCT