Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00081 ATGGGTTCAAGATCTGCGGAAGGAGAACAAGTACCACTCACTGACGAGTATGATGCCTTGATTTCAACCACTGATGTTGAGCTTCTCAAGCGAGCATGGCGTAATGAAAAAGCAGCCCCTGAGATTCTTCGTTTTGAATCTGATTTGATCATCCGTGTCAGAGAACAGATTGAATTGATGGAAGAAACTGTGGAGGAGAAATCGACTGTTGGTACTGATCCTCTTTCAGTATCTCTGTATCAGATGGACTTGGATAGAACCCTGTTTTTATTAAGGTCATACCTTCGCATCCGCATCCAGAAGATTGAAAAGTACATGTTCCACATCCGAAAAACTGAAGAACTTTGGAACAGGCTTTCTAAGGATGAGAAATTTTTCACTGAAAGGAAAGGCTACCCTATATTTTTTTCTGACTACCAATGTTTTTCGGTTTGCAGGTGTACAGATGACCTAAAGAAGCATCTGGAGGAGAGTGTTCTATCAACACTGCCTGAAAATTATCAGTCTTATGAGAGGCAATCTGTAATTAGTGAAGAGGTTGACATGGTTCCAGAACCACGACTCGACACATTTGTTTTGTGTAGAAGTAAAGAATATCTCACAGGCATTCAACTTGAAGATGGACCTGTTGATGACAGGTCGAAGCTGTTTGAGATGGAGCCTGATGTCCTTTACTTCATATGTTACAAATCAATAAAGCCACTTGTAGAGAGTGGCAAAATTGATCTTCTATGA 735 0.4068 MGSRSAEGEQVPLTDEYDALISTTDVELLKRAWRNEKAAPEILRFESDLIIRVREQIELMEETVEEKSTVGTDPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKYMFHIRKTEELWNRLSKDEKFFTERKGYPIFFSDYQCFSVCRCTDDLKKHLEESVLSTLPENYQSYERQSVISEEVDMVPEPRLDTFVLCRSKEYLTGIQLEDGPVDDRSKLFEMEPDVLYFICYKSIKPLVESGKIDLL 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00081 244 PIRSF GINS_Sld5 2 133 IPR008591 GO:0006261
Car04g00081 244 PIRSF GINS_Sld5 136 244 IPR008591 GO:0006261
Car04g00081 244 Pfam GINS complex protein 58 124 IPR021151 -
Car04g00081 244 Pfam DNA replication complex GINS protein SLD5 C-terminus 186 244 IPR031633 -
Car04g00081 244 Gene3D - 14 234 - -
Car04g00081 244 CDD GINS_A_Sld5 25 160 IPR038749 -
Car04g00081 244 SUPERFAMILY PriA/YqbF domain 188 244 - -
Car04g00081 244 SUPERFAMILY GINS helical bundle-like 22 174 IPR036224 -
Car04g00081 244 PANTHER SLD5 PROTEIN 146 244 IPR008591 GO:0006261
Car04g00081 244 PANTHER SLD5 PROTEIN 9 129 IPR008591 GO:0006261
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00081 Car-Chr4 814389 816902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00081 1 191 Core DNA Replication Machinery Family AT5G49010 54.450 2.37e-60 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00081 K10735 - gmx:100784291 332.028