Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00075 ATGTCTACTGTGTCTAAAGATGATAACTTGGCACTTTCTTCAGAAGATTCTTCTAGCCCAGATGAGTCTGAGCTTGAATTGGGTCTTGGGCTAAGCCTTTCTCACACTGTTAAAGCGCATCAGTATCATAATCACCAACATGCTTCTTATGCTAGAATTTTCACTGCTAAGGATTTTTCTTCTTCTCCTTCCTCTGCTGGGAACAAGAGACCTGCTGATTCTCTTGATGCTACCAACCGTCCAAGTCAAGTAGTTGGATGGCCTCCCCTTCGAACATATCGAGTGAATAGCTTTAATAACCAAGTTAAATCAACTGAACCATTTAACTCTGTGGCCGAGAAGAGCAAGAACAATAATACTGTGGTTAGGAAGAATACTGACAACAGAGTCATAGATAACAGCATTAATATCAAAGATAAAAGACACGTCAAGAATTCCCCATTTGTCAAAGTAAATATGGATGGGATACCGATTGGAAGAAAGGTTAATTTGAGCTCTCACAGTTCCTACGAAACCTTGGCACAGACATTGGAGGACATGTTTAACGAATACGAATCAACTACAGGATCAAGTGGGAAGGATCACGACATGACTATCCGAGGAGAATGGCATTCAAAATTGTTGGATGGATCTTCTAAATTTGTACTGACTTATGAAGACAAAGAAGGAGATTGGATGCTTGTTGGAGATGTTCCTTGGGGGATGTTCGTTAGTTCTGTGAAGAGACTAAGAATCATGAGGACATCCGAGGCTAACGGACTCGGACCAAGATTGGAAGAAAAGAACATCAGACAGAAAAACAAGCCTATATAG 813 0.4071 MSTVSKDDNLALSSEDSSSPDESELELGLGLSLSHTVKAHQYHNHQHASYARIFTAKDFSSSPSSAGNKRPADSLDATNRPSQVVGWPPLRTYRVNSFNNQVKSTEPFNSVAEKSKNNNTVVRKNTDNRVIDNSINIKDKRHVKNSPFVKVNMDGIPIGRKVNLSSHSSYETLAQTLEDMFNEYESTTGSSGKDHDMTIRGEWHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFVSSVKRLRIMRTSEANGLGPRLEEKNIRQKNKPI 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00075 270 Pfam AUX/IAA family 48 257 IPR033389 -
Car04g00075 270 Gene3D - 141 259 - -
Car04g00075 270 MobiDBLite consensus disorder prediction 59 83 - -
Car04g00075 270 MobiDBLite consensus disorder prediction 1 25 - -
Car04g00075 270 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 9 260 IPR003311 GO:0005634|GO:0006355
Car04g00075 270 ProSiteProfiles PB1 domain profile. 146 250 IPR000270 GO:0005515
Car04g00075 270 SUPERFAMILY CAD & PB1 domains 142 246 - -
Car04g00075 270 MobiDBLite consensus disorder prediction 1 18 - -
Car04g00075 270 PANTHER AUXIN-RESPONSIVE PROTEIN IAA11 9 260 - -
Car04g00075 270 MobiDBLite consensus disorder prediction 59 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00075 Car-Chr4 773905 777047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00075 150 257 B3 DNA Binding Superfamily AT1G59750 33.333 1.63e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Car04g00075 AUX_IAA 1.5e-61 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00075 K14484 - gmx:100779400 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00075 04 773905 777047 Car04g00075 04 773905 777047 ECH