Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00074 ATGCAGCTGAAAACTCAGTTTTTCATCTTCTGTTGCGTTTGCTGTTTCCCTTATAGCTTTGCTTCTGCAGCAAATAATGAAGTATCTGCTTTACTTTCTATTAAAGCAGGTCTCATTGATCCATTGAATAGCCTAAAAGATTGGAAGGTGTGGGACAAAGCAATAGGGAAGAGTGCATATGCAGCTCAAGCTCATTGTAATTGGAATGGTGTCAAGTGCAACTCAGCTGGAGCTGTTGAGAAGCTTGATCTATCACACATGAATCTAAGTGGAAGTGTCTCCAATGAGATACAAAATCTAAAAAGTCTCACTTTTCTTAACTTGTGCTGCAATGGATTTGAGTCATCACTGTCAAATTCCATAGCCAATATTTCAATGCTAAAGAGTCTGGACGTGAGCCAGAATTTCTTCATTGGTGAATTTCCATTAGGCCTTGGAAAGGCGTCCGGACTCGTGACCTTGAATGCATCCAGCAACAACTTCTCAGGTTATCTTCCTGAGGAACTTGGAAATATCTCTTCCTTGGAGACACTAGACTTTAGAGGAAGCTTCTTTGAAGGCTCTATTCCGAAATTCATTGGTAACTTGAGTAAGTTGAAGTTCCTTGGTCTATCAGGGAATAATCTCACTGGTAAGATCCCGGTTGAGCTTGGAAAACTTTCTTCACTGGAGTCTATGATCATTGGTTATAACGAATTTGAAGGTGGAATTCCAAAAGAGTTTGGAAATTTAACCAAGTTGAAGTATCTTGATTTAGCAGAAGCCAACCTTGGTGGTGAAATTCCTGATGAGTTGGGAAAGCTCAAGCGTTTGAACACAGTTTTCTTATACAAGAACAGTTTTGAAGGAAAGATTCCAACAACTATTGGAAACATAACTTCCTTGGTTCTGCTGGATCTCTCAGACAACATGTTATCAGGAAATATTCCAGCTGAAATAAGTCAGCTGAAGAATTTGCAGCTTCTGAACTTCATGAGGAACAAGTTATCTGGTCCTGTGCCTTCTGGCCTTGGAGATTTGCCTCAACTAAAGGTACTTGAGCTATGGAATAATTCCTTGTCAGGGTCATTGCCTAGTAACCTCGGCAAGAACTCGTCGTTGCAGTGGTTGGATGTATCATCCAATTCACTCTTCGGCGAGATTCCAGAAACTCTTTGCACTAAGGGAAATCTCACCAAGCTTATACTTTTCAACAATGCCTTCAAGGGTCCAATTCCAGCAAGCCTATCGAAATGTCCTTCGCTTGTTCGCGTTCGGATTCAAAATAATTTTCTTTCTGGTACAATTCCTGTTGGTTTTGGTAAGCTTGAGAAGCTTCAGAGGCTAGAATTGGCTAACAATAGTCTCACTGGTGGAATTCCTGATGACATTGCTTCTTCCACTTCTCTTTCATTCATTGATTTCTCAAGAAACAACCTTCATTCTTCTCTTCCTTCCACCATTATTTCCATTCTGAATCTGCAAACATTCATAGTCTCAAACAACAATTTGGAAGGTGATATACCAGACCAATTCCAGGATTGTCCCTCGCTCGGAGTCCTCGATCTCTCATCAAACTTTTTCTCCGGAATCATTCCAAAAAGCATTGCTTCATGTCAGAAATTGGTAAAATTGAGCCTGCAGAACAACCGATTGACAGGTATCATCCCAAAAGCAATAGCAGCCATGCCTACATTGGCCATTCTTGATCTTGCTAATAACTCTCTAACAGGTAAAATACCTGATAGCTTCGGTATGTCTCCGGCTCTAGAAACATTCAATGTCTCATACAACAAGCTAGAAGGTCCTGTCCCGGAAAATGGCATGCTAAGAGCAATAAATCCAAATGATCTTGTAGGAAATGCTGGCCTATGTGGTGGTGTCTTCCCTCCATGTGAAAAAACCTCAGCATATTCTTCATTGAGGCGTGGAAGCTCACACATAAAGCATGTTATTGTAGGATGGATCATTGGAATATCATTTATCTTGGCCATTGGAGTTTCTACTTTGGTAGCAAGATCTATATACATGAAATGGTACACTGAAGGATTGTGCTTCCGAGGAAGATTTTATAGAGGTAGCAAAGCCTGGCCTTGGAGATTGATGGCATTTCAAAGACTCGATTTTACAAGCACTGATATCTTATCCTGCATCAAGGAAACAAACGTTATCGGCATGGGAGCAACTGGTGTTGTTTATAAGGCTGAGATACCACAATCAAGTACAGCTGTGGCAGTCAAAAAATTGTGGAGATCAGGATCTGATATCGAAACGGGAAGTAGCGATGATCTTATCGGAGAGGTGAATCTTTTAGGGAGACTAAGGCATAGAAACATTGTTAGACTACTAGGATTTCTTTATAATGACACTGATGTTATGATAATTTATGAGTTTATGCTCAATGGAAATCTTGGACATGCCTTGCATGGTAAGCAATCGGAGAGATTGCttgtagattgggtttcgcgatataatattgctctaggagttgcacatggacttgcttatcttcatcatgactgtcatccacctgttattcatcgagacatcaagtcgaataatatactgcttgacgcaaatctcgaggcaaggatagcagatttcggattagccaagatGATGATCCGGAAGAATGAAACAGTCTCCATGATTGCTGGATCATATGGATACATTGCCCCTGAATATGGATACTCATTGAAGGTAGATGAAAAGATTgacatttacagctttggaatagtcctgttggagctcataacaggaaAACGGCCATTAGATTCAGAGTTTGGAGAATCTATAGACATTGTAGGGTGGATTAGAAGGAAGATAGACAAAAATTCTCCAGAAGAGGCATTAGATCCTAGTGTAGGAAACTGCAAGCTTGTTCAAGAAGAGATGCTTTTAGTTCTCAGAATAGCACTTCTTTGCACTGCCAAACTACCTAAGGACAGACCCTCCATGAGAGATGTTATTATGATGCTAGGAGAGGCAAAGCCAAGGAGGAAAAGTGGTAGAAAAAATGAAACAGTATCTGCTAACAAAGAGATGACAGTAGTTGGTACATCACCAGTTAATGGCCTTCTTTAG 3063 0.3764 MQLKTQFFIFCCVCCFPYSFASAANNEVSALLSIKAGLIDPLNSLKDWKVWDKAIGKSAYAAQAHCNWNGVKCNSAGAVEKLDLSHMNLSGSVSNEIQNLKSLTFLNLCCNGFESSLSNSIANISMLKSLDVSQNFFIGEFPLGLGKASGLVTLNASSNNFSGYLPEELGNISSLETLDFRGSFFEGSIPKFIGNLSKLKFLGLSGNNLTGKIPVELGKLSSLESMIIGYNEFEGGIPKEFGNLTKLKYLDLAEANLGGEIPDELGKLKRLNTVFLYKNSFEGKIPTTIGNITSLVLLDLSDNMLSGNIPAEISQLKNLQLLNFMRNKLSGPVPSGLGDLPQLKVLELWNNSLSGSLPSNLGKNSSLQWLDVSSNSLFGEIPETLCTKGNLTKLILFNNAFKGPIPASLSKCPSLVRVRIQNNFLSGTIPVGFGKLEKLQRLELANNSLTGGIPDDIASSTSLSFIDFSRNNLHSSLPSTIISILNLQTFIVSNNNLEGDIPDQFQDCPSLGVLDLSSNFFSGIIPKSIASCQKLVKLSLQNNRLTGIIPKAIAAMPTLAILDLANNSLTGKIPDSFGMSPALETFNVSYNKLEGPVPENGMLRAINPNDLVGNAGLCGGVFPPCEKTSAYSSLRRGSSHIKHVIVGWIIGISFILAIGVSTLVARSIYMKWYTEGLCFRGRFYRGSKAWPWRLMAFQRLDFTSTDILSCIKETNVIGMGATGVVYKAEIPQSSTAVAVKKLWRSGSDIETGSSDDLIGEVNLLGRLRHRNIVRLLGFLYNDTDVMIIYEFMLNGNLGHALHGKQSERLLVDWVSRYNIALGVAHGLAYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMIAGSYGYIAPEYGYSLKVDEKIDIYSFGIVLLELITGKRPLDSEFGESIDIVGWIRRKIDKNSPEEALDPSVGNCKLVQEEMLLVLRIALLCTAKLPKDRPSMRDVIMMLGEAKPRRKSGRKNETVSANKEMTVVGTSPVNGLL 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00074 1020 Gene3D Ribonuclease Inhibitor 388 629 IPR032675 -
Car04g00074 1020 Gene3D Ribonuclease Inhibitor 23 181 IPR032675 -
Car04g00074 1020 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 1002 - -
Car04g00074 1020 Pfam Leucine rich repeat 413 473 IPR001611 GO:0005515
Car04g00074 1020 Pfam Leucine rich repeat 534 593 IPR001611 GO:0005515
Car04g00074 1020 SMART serkin_6 711 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00074 1020 ProSiteProfiles Protein kinase domain profile. 711 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00074 1020 Gene3D Ribonuclease Inhibitor 182 286 IPR032675 -
Car04g00074 1020 PANTHER UNNAMED PRODUCT 6 1002 - -
Car04g00074 1020 Pfam Protein kinase domain 713 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00074 1020 ProSitePatterns Protein kinases ATP-binding region signature. 717 741 IPR017441 GO:0005524
Car04g00074 1020 Gene3D Transferase(Phosphotransferase) domain 1 796 1012 - -
Car04g00074 1020 Gene3D Ribonuclease Inhibitor 287 387 IPR032675 -
Car04g00074 1020 SUPERFAMILY Protein kinase-like (PK-like) 702 986 IPR011009 -
Car04g00074 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 838 850 IPR008271 GO:0004672|GO:0006468
Car04g00074 1020 Pfam Leucine rich repeat N-terminal domain 24 74 IPR013210 -
Car04g00074 1020 SUPERFAMILY L domain-like 65 353 - -
Car04g00074 1020 SMART LRR_typ_2 340 364 IPR003591 -
Car04g00074 1020 SMART LRR_typ_2 100 123 IPR003591 -
Car04g00074 1020 SMART LRR_typ_2 532 555 IPR003591 -
Car04g00074 1020 SMART LRR_typ_2 244 268 IPR003591 -
Car04g00074 1020 SMART LRR_typ_2 196 220 IPR003591 -
Car04g00074 1020 SMART LRR_typ_2 292 316 IPR003591 -
Car04g00074 1020 SMART LRR_typ_2 556 579 IPR003591 -
Car04g00074 1020 SMART LRR_typ_2 436 460 IPR003591 -
Car04g00074 1020 SUPERFAMILY RNI-like 257 600 - -
Car04g00074 1020 Gene3D Phosphorylase Kinase; domain 1 711 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00074 Car-Chr4 769305 773056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00074 1 1020 Receptor kinase-like Gene Family AT1G08590 59.538 0.0 1172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car04g00074 Pkinase 7.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00074 - - gmx:100788430 1708.35