Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00069 ATGGGTATCGCACAATTTCTCCGAAAAATCTCACCTTTTGAAActtcttcttcttcttcttcttcttcttcttcttcttcttcttcttcAGGGTCGTTGAATGTTCGTTCCAGCATGATTATGGGTTTATCTTTATTGGAACTTGCAGCAATATGCGTCAACTTGACTCTTGTTCTGCTGTTTCTCTTTCTTTTCTCGTTGAGAAAGATTTTTCTGTACCAAGGAATTCAAATTGGGAAGAAGGACACTGCAGATAATCATAGGATTCATACCCCAATTTGCGTTGTCATTGATGGAGAAACACAAACACGTCATAATATTTCAATAGGTGCTTGGTTCAAGTTATCTGTGTTTTCTTGTTTCTATGTTCTGTTTGTGCAAGTTTTCATTTTGGGGTTTGATGGGGTTGCTTTGATTTTCGGTGAGGCTAATGGAAAACTATTAGTACATTGGTCTCTTCTTTCTGAGTCAGGTTCAAATGTTTTGGCTTGGTCTGTGTTGAGCTTCTCAGCTTTGAATTGCAAATTCAATGTGTCAGAAAAGTTTCCACTTTTGTTAAGAGTTTGGTGGTTTTTATCATTTGTTATTTGCTTGTGTACTTTGTATGTTGATGGAAGAGACTTTTGGGTGGAAGGTTCTATGTATCTTAGTTCTCATGCTGTTGCAAATTTTGCTGTCACACCAGCTCTTGCTTTTTTAGGTGTAGTTGCAATCAGGGGTGTTACTGGTATACAAATTTGTGGAAACTTAGAACTTCAAGAGCCATTACTTGTTgaagaagaagaagaagaaCCAGGGTGTCTCAAAGTTACTCCATATAGAGATGCTGGACTTTTTAGCTTAGCCACTCTTTCATGGCTGAATCCACTTCTTTCCATTGGTGTAAAGAGACCACTTGAGCTTAAGGACATTCCCCTTGTTGCACCAAGTGATAGAGCCAAGACAAGTTACAAGGTTTTGAATTCTGCCTGGAAGAGATTGAAGGCTGAAAATCAAAATTCTTCTAAGCAACCTTCATTAGCTTGGGCTATTCTCAAGTCATTTTGGAAAGAAGCAGCTGTGAATGCCGTCTTTGCTGGTATGAATACTTTGGTTTCATATGTAGGTCCATACATGATTAGTTACTTTGTTGATTTCTTGAGTGGTAAAGAGACTTTTCCTCATGAGGGTTATATCCTTACTGGTATATTCTTTGTTGCAAAGCTTGTAGAAACATTGACAACTAGGCAGTGGTATTTAGGAGTAGATATATTGGCTATGCATGTTAGGTCCGCTCTAACAGCAATGGTGTATAGAAAGGGACTTAGACTTTCGAGCTCGGCGAAGCAAAGTCACACAAGCGGCGAGATTGTTAACTACATGGCTGTTGATGTTCAGAGGGTAGGTGACTACGCTTGGTACCTTCATGATATGTGGATGCTTCCTCTGCAGATTGTTCTTGCACTTGTGATTTTGTATAAGAATGTTGGAATTGCCTTTGTTGCAACGTTGTTTGCTACAATCATTTCCATTGCTGTCACCATTCCTGTTGCTAGGATACAAGAAGAGTATCAAGACAATTTAATGGCTGCTAAGGATGAAAGGATGAGGAAAACGTCAGAGTGTTTGAGAAATATGAGGATTCTTAAGCTTCAAGCTTGGGAGGATCGATATAGAATAAAATTGGAAGAAATGCGCGGAGTAGAGTTCAAGTGGCTAAGGAAAGCACTCTATTCTCAGGCTTTCGTAACTTTCATGTTTTGGAGCTCGCCTATATTTGTTTCGGCCGTCACGTTTGCTACTACCATATTTTTAGGAACTCAGCTCACTGCGGGCAGTGTTCTCTCAGCTCTAGCTACTTTCAGGATTCTACAAGAACCTCTCAGAAATTTTCCGGACTTGGTATCAACCATGGCGCAGACAAAGGTTTCTCTTGATCGCCTATTTTGTTTCCTGCAGGACGAAGAATTACGGGAAGATGCAACTACTGTCTTGCCGTGTGGAACTTCTAACATCGCTATAGAAATTATGGATGGTGTCTTCTGCTGGGACACTTTTTCCGCTAGGCCTACTCTATCGGGAATACATATGAAAGTCGAAAGGGGGATGAGTGTAGCTGTTTGTGGCATGGTTGGTTCCGGGAAATCAAGTTTTCTTTCTTGCATCCTTGGAGAGATTCCCAAACTTTCTGGTGAAGTAAGAGTGTGTGGTTCTGCTGCATATGTTTCACAATCAGCATGGATACAGTCAGGAAATATAGAAGAAAATATTCTGTTCGGAAACCCAATGGATAAAGCAAAGTACAAGAATGTTATCCATGCTTGTTCACTGAAAAAGGACCTAGAACTTTTCTCACATGGCGACCAAACAATAATTGGTGATAGAGGTATAAACTTGAGTGGTGGACAGAAGCAGCGGATTCAGCTTGCACGAGCACTCTACCAAGATGCCGATATTTATCTCCTTGATGATCCCTTTAGTGCACTTGATGCCCACACTGGATCAGAATTATTCAGAGAGTATGTATTGACAGCATTAGCAGATAAAACTGTCATTTTTGTGACCCATCAAGTTGAATTTCTTCCAGCTGCTGATATGATACTGGTTCTTAAAGAAGGCCGAGTCATACAGACAGGAAAATATGATGATCTTTTACAAGCAGGAACGGATTTTAGATCTCTAGTTTCAGCTCACAATGAAGCAATAGAGGCTATGGACATTCCTATTCACTCCTCAGATGATTCAGATGAAAATGAGTCATTGGATGGATCTATTATGACCAGTAAGAAATCTATTTCTTCTATAAATGATATTGATAGTTTGGCAAAGGAAGTTCAAGAGGGATCATCAGTTCCAACAGCAATTAAGGAAAAGAAGAAGGCAAAACGCTCAAAGAAAAAACAGCTTGTACAGGAAGAGGAGAGGGTACGAGGTAGAGTCAACATGAAGGTGTACTTGTCTTACATGGCTGCAGCATATAAAGGCTCATTGATTCCCCTCATAATCATCGCACAAACGTTATTTCAGTTCCTTCAGATTTCCAGCAATTGGTGGATGGCTTGGGCGAATCCTCAAACTGAGGGAGACCAACCGAAAGTAACTCCCAAAGTTCTTCTTCTTGTTTACATGGCCCTTGCCTTTGGAAGCTCATGTTTCATATTTGTAAGGGCTGTTCTTGTGGCTACATTCGGTCTAGCAGCAGCACAGAAGCTTTTTTTCAACATGCTTAGAAGTATTTTCCATGCTCCAATGTCTTTCTTTGACTCTACACCGGCTGGAAGGATCCTGAATCGCGTTTCAGTTGATCAAAGTGTTGTGGATCTTGACATTCCTTTTAGACTTGGAGGGTTTGCTTCATCAACGATACAGCTTATTGGCATTGTTGCTGTAATGTCAGAAGTTACATGGCAAGTTTTGCTCCTAGTAATACCAATGGCAATTATTTGTGTGTGGATGCAGAAATACTACATGGCTTCCTCAAGGGAACTCGTACGTATTGTAAGCATTCAAAAATCTCCAATTATACAACTTTTTGGTGAATCAATTGCTGGAGCAGCAACCATCAGAGGGtttggacacgaaaaaaggttcatgaagaggaacctctatcttctggaTTGTTTCGCACGACCATTCTTCTGCAGTATTGCAGCTATTGAGTGGCTTTGCCTGCGCATGGAATTACTTTCGACCTTTGTATTTTCTTTCTGCATGGTATTACTTGTGAGCTTTCCCCGTGGAAGTATAGACCCTAGCATGGCTGGACTTGCTGTGACGTATGGTCTGAATTTAAATGGACGTTTGTCTCGCTGGATACTTAGCTTTTGTAAACTTGAAAATAAAATTATATCTATTGAAAGAATTTATCAGTACAGTCAAATTCCTAGAGAGGCGCCAGCAGTTATTGAAGATTCTCGCCCTCCATCCTCATGGCCCCAGAATGGGACAATCCAACTAATTGATCTGAAGGTTCGGTACCAGGAAAATCTTCCCTTGGTGCTTCATGGAGTATCCTGCACATTTCCTGGTGGGAAGAAGATTGGAATAGTTGGACGAACTGGCAGTGGCAAATCAACTTTGATTCAGGCATTATTTCGATTGGTTGAACCAGAAACCGGGAGTATTCTCATAGACAACGTTGATATCTCAGGGATTGGCCTTCATGACCTTCGGAACCATTTGAGTATCATACCACAAGATCCAAACTTATTTGAAGGCACCATTCGAGGTAATCTGGATCCTCTTGAAGAACATTCTGATAAAGAGATTTGGGAGGCACTAGATAAGTCTCAGCTTGGAGATATCATCCGCGAGAAAGGACAAAAGCTCGATACACCAGTGCTAGAAAATGGTGATAATTGGAGTGTAGGACAGCGTCAACTTGTTTCTCTTGGCCGAGCTCTTCTCAAGCAATCAAAGATACTTGTACTTGATGAAGCAACAGCATCTGTTGATACTGCTACTGATAATCTTATCCAGAAGGTTATCCGGAAAGAGTTCAGAGACTGCACTGTGTGTACTATTGCGCATCGTATTCCTACTGTTATTGACAGTGATCTTGTTCTAGTACTCAGTGACGGCCAAGTTGCAGAGTTTGACACTCCATTGCGGCTATTAGAAGATAGGTCATCCATGTTTTTGAAGTTGGTGACTGAATATTCATCGCGATCAAGTGGCATACCGGATTTTTAA 4671 0.3991 MGIAQFLRKISPFETSSSSSSSSSSSSSSSGSLNVRSSMIMGLSLLELAAICVNLTLVLLFLFLFSLRKIFLYQGIQIGKKDTADNHRIHTPICVVIDGETQTRHNISIGAWFKLSVFSCFYVLFVQVFILGFDGVALIFGEANGKLLVHWSLLSESGSNVLAWSVLSFSALNCKFNVSEKFPLLLRVWWFLSFVICLCTLYVDGRDFWVEGSMYLSSHAVANFAVTPALAFLGVVAIRGVTGIQICGNLELQEPLLVEEEEEEPGCLKVTPYRDAGLFSLATLSWLNPLLSIGVKRPLELKDIPLVAPSDRAKTSYKVLNSAWKRLKAENQNSSKQPSLAWAILKSFWKEAAVNAVFAGMNTLVSYVGPYMISYFVDFLSGKETFPHEGYILTGIFFVAKLVETLTTRQWYLGVDILAMHVRSALTAMVYRKGLRLSSSAKQSHTSGEIVNYMAVDVQRVGDYAWYLHDMWMLPLQIVLALVILYKNVGIAFVATLFATIISIAVTIPVARIQEEYQDNLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIKLEEMRGVEFKWLRKALYSQAFVTFMFWSSPIFVSAVTFATTIFLGTQLTAGSVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRLFCFLQDEELREDATTVLPCGTSNIAIEIMDGVFCWDTFSARPTLSGIHMKVERGMSVAVCGMVGSGKSSFLSCILGEIPKLSGEVRVCGSAAYVSQSAWIQSGNIEENILFGNPMDKAKYKNVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRIQLARALYQDADIYLLDDPFSALDAHTGSELFREYVLTALADKTVIFVTHQVEFLPAADMILVLKEGRVIQTGKYDDLLQAGTDFRSLVSAHNEAIEAMDIPIHSSDDSDENESLDGSIMTSKKSISSINDIDSLAKEVQEGSSVPTAIKEKKKAKRSKKKQLVQEEERVRGRVNMKVYLSYMAAAYKGSLIPLIIIAQTLFQFLQISSNWWMAWANPQTEGDQPKVTPKVLLLVYMALAFGSSCFIFVRAVLVATFGLAAAQKLFFNMLRSIFHAPMSFFDSTPAGRILNRVSVDQSVVDLDIPFRLGGFASSTIQLIGIVAVMSEVTWQVLLLVIPMAIICVWMQKYYMASSRELVRIVSIQKSPIIQLFGESIAGAATIRGFGHEKRFMKRNLYLLDCFARPFFCSIAAIEWLCLRMELLSTFVFSFCMVLLVSFPRGSIDPSMAGLAVTYGLNLNGRLSRWILSFCKLENKIISIERIYQYSQIPREAPAVIEDSRPPSSWPQNGTIQLIDLKVRYQENLPLVLHGVSCTFPGGKKIGIVGRTGSGKSTLIQALFRLVEPETGSILIDNVDISGIGLHDLRNHLSIIPQDPNLFEGTIRGNLDPLEEHSDKEIWEALDKSQLGDIIREKGQKLDTPVLENGDNWSVGQRQLVSLGRALLKQSKILVLDEATASVDTATDNLIQKVIRKEFRDCTVCTIAHRIPTVIDSDLVLVLSDGQVAEFDTPLRLLEDRSSMFLKLVTEYSSRSSGIPDF 1556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00069 1556 SUPERFAMILY ABC transporter transmembrane region 342 649 IPR036640 GO:0005524|GO:0016021
Car04g00069 1556 SUPERFAMILY ABC transporter transmembrane region 990 1290 IPR036640 GO:0005524|GO:0016021
Car04g00069 1556 Pfam ABC transporter transmembrane region 994 1235 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car04g00069 1556 Pfam ABC transporter transmembrane region 357 621 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car04g00069 1556 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 664 889 IPR027417 -
Car04g00069 1556 SMART AAA_5 694 875 IPR003593 -
Car04g00069 1556 SMART AAA_5 1336 1529 IPR003593 -
Car04g00069 1556 CDD ABCC_MRP_domain1 667 867 - -
Car04g00069 1556 Gene3D ABC transporter type 1, transmembrane domain 952 1291 IPR036640 GO:0005524|GO:0016021
Car04g00069 1556 Gene3D ABC transporter type 1, transmembrane domain 322 647 IPR036640 GO:0005524|GO:0016021
Car04g00069 1556 MobiDBLite consensus disorder prediction 945 965 - -
Car04g00069 1556 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1310 1544 IPR003439 GO:0005524
Car04g00069 1556 CDD ABC_6TM_ABCC_D2 991 1285 IPR044726 GO:0140359
Car04g00069 1556 Pfam ABC transporter 1327 1475 IPR003439 GO:0005524
Car04g00069 1556 Pfam ABC transporter 685 819 IPR003439 GO:0005524
Car04g00069 1556 Gene3D - 648 904 IPR027417 -
Car04g00069 1556 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 103 1556 - -
Car04g00069 1556 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1300 1540 IPR027417 -
Car04g00069 1556 Gene3D - 1293 1546 IPR027417 -
Car04g00069 1556 Coils Coil 948 968 - -
Car04g00069 1556 CDD ABCC_MRP_domain2 1308 1528 - -
Car04g00069 1556 Coils Coil 514 534 - -
Car04g00069 1556 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 356 633 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car04g00069 1556 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 103 1556 - -
Car04g00069 1556 ProSitePatterns ABC transporters family signature. 792 806 IPR017871 GO:0005524
Car04g00069 1556 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 993 1263 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car04g00069 1556 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 667 890 IPR003439 GO:0005524
Car04g00069 1556 CDD ABC_6TM_ABCC_D1 354 641 IPR044746 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00069 Car-Chr4 741421 749534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00069 678 883 Calmodulin-binding Proteins AT2G36910 32.000 4.38e-21 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00069 - - cam:101514243 2971.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00069 04 741421 749534 Car04g00069 04 741421 749534 ECH
Car03g02368 03 69583926 69592137 Car04g00069 04 741421 749534 PCT