Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00068 ATGGCAAACCTTTCAAATTTGAAGGATGTTGTTGAGTTagaagaagatgaagaagaagatgaatttgaaAGCTTCTCGTATGCTATGCAGCTTAGTACCTCTATTACGCTTTCGATGGCACTTCAAACCGCTGCTGAGATTGGGATATTTGATGTGTTGCAAAAAGCAGGTAAAGGTGCTCCACTCTCTGCCCACGATATTGTTTCGCGTATTTCCTTTAACAATATCAATAATCCAGAAGAAGCTGCTAGAATGTTAGATCGAATTCTTGCTCTTCTTACCTCTCACTCTATCCTCAACTGTTCTATCCTTCAAGATCAACAAAAACTTGGATACACTATGGCTCCTGTTGCTAGATTCTTTGCTCCTAATTCTGATGGTGTTTCACTTGCTCCTTTGTTAGCATTAACTAATGATAAAATATATTTAGATGTCTGGTCGCAGTTTAATGATGCAATTCGGGAAGGGGGTAATTCATTCAAGATGGTTCATGGGGCAGATATATTTGAGTATTGTAGGTTGGACTCGAGGTTCAATAAAGTATTCAATAGAGCGATGATGAATCACAGCACTATAGTTATGAAGAAGGTTCTTGAATGCTACAAAGGTTTTGAGGAGGTAAAAAGAGTTGTAGATGTTGGTGGAGGTGTTGGGATGAGCATTAACATGATAACTTCAAAGTACCCTCATATAAAGGGTATCAATTTCGACTTGCCTCATGTCATACAACATGCCCCTTCCTATCCCGGAGTGGAGCACATTGGTGGAGATATGTTTCAAAGTGTGCCCAATGGAGATGTCGTCTTTATGAAGTGGATACTTCATGATTGGAGCGATGAATACTCTTTAAAACTCTTGAAGAATTGCTATGATGCTATTCCTGATGATGGAAAGGCGCAGGATTGTTTTGGATTCAACGGTGGATGGATAGTACAATTGCATCTCTTGCTATATCCTAAATACACACGTGTGTACTGTTGCTACCATCATCGTATGGATCCTACTTCGGCAACCCTACCGTGTTTGGCGCTGTTCAATGAAGATCTTGTTAGGCTTCTTCAATTACTCTCTGTCCCACCATCATCTTCTATTGCAATCCAATTTTCACACTCTCTACTTTCGCACAACCCAGCTACGAGTGTAGAAGGCATGCCTGTGGTGTTGGATATAAGTTCCGATGAAGATGAGGGTTTGAAAGAGGGACCCAAAAATTCTGATCTAGAATGGATTCAAGAGTTGCTCTTCAATTCTGACGATGAAGAATCAAATGCTGATTCTGATGATGTTGTCATCCTTCATGAGACCAAACCACAACAACACTTCAAGTCAAAGGCTATTTCAACTTTGTCTGTAAatgatggtgatgatgacgatgatgattgtgtggttcttgagggtgatcctgaaaatggtgttacttctgttgatgatgaGGGTGCAAATGGATCAGATGAGTTGCTTGTAGTTGGGGAAAAGGGTCAAGTTGCATGTAGAGACTATCCTCATGCGCGGCATCTTTGTGCTAAATTTCCTTTCTCTTCCACCCCTCACGAGAAACACTGTGGCCAGTGCCACTGTTATGTCTGCGACTCCCTAGCACCGTGTCTAAAGTGGGGTACTGGCATTTTGAATACAGATCATTGTCATGCAAACGATAAAACTGATATGTGGAAAGTTCAGAGGAAAGATTTCCGGCGGACCCAGAGTTCCCCATTACCGGCTTCAACTAATTATGGTACTTCACATGGCGTGGTACGTTCCCAACGTTTCGAAAATCTGCCTCGTGATATTAATCACTTGTCTCCAAATTCTGTGTTACGGAAACAACCATCAAGATCAACTGTAATGCACACTCCCTCCTCACTCAACAGCATATCTCAAAATCAGGTCTCTCGACCAAAATCAACGTATGCCCACTACTCACTAAGTTCTGGTACGCAGAATCCGATCGTTAGATCAATTAACATCCCTGTATCCCGTACAGCCACCAATCTAACAATCCCAAATGGTGCAAACCATGGTAGTAGATATGTGCAACCAAGATCTACTTTGGCGAGAGACCGAAGCCGGCCTCATTCTGTACAGTTGTTGGGTGTACGCAGTCATGCCATCCAAAAGGAACGGGAAAGGGTTGCAATCAGTTTACGACCACAGTTCCTCCGCTCTCCTATGATGTCCAAGGGAGTTGTAGGTCGCACTATGGGGGACACTCTGGCAGTGAATCATATGTCTCATGGTTCATCTTGCTTCAACAATCATGTTAATGCAGTACATCAACATGACAAATTTCACACTGCAACAGGATTCTCAAATCCCATAAATTGCAATGGGCCAGGGGATGTTTGTCCCTCCATAAATCTATCAACTTTCTCAGACTCAATCTCAGGACCGGTCAGCCTTAGTTGTGTCAACCAGTGTACCGTGACTCCGGAAACCCAAGTATATGGCCAAACACTGTCCCAACCGAACGATAGCCTGAATTTCCGTCAAACTTGTATTCAAGGTAATGATGCTCCTTATGTTGCATGCCTGAATAGCaatcaacatggaaatgacattcaaatcaaaagtcaagatgaaagtgctaatggaaatATTACACATAGTGGAATTACAAGTCAAGATACTTTCCAACCAAAGGCACATGAAGAAATTCCAAATATAACTTCCAGCGCCGAGGGAGTTTCTGCTTTTGACTCAAGTTGGGCGGCAAAAACCAATCAAAGCATTGAACTTCTAGTTGAAGGCTCCGCTCTACAAAGCTCAGGATCTATAGACCAATCATCCAATGTTGAAAACTCCAGTACTGATCAGTTTACCGGAAACATTGAACCGCAAAATGAAAGTTTTCATATACCTAGTTCGATGGTTGATATTGAAAACTGGCTTTTGGGAAAAGACTCTTCTCAAATGGGAACAGATGATGTTTTGTCATTTGAAATGAATATCCCATCTCCAGATCCTAGTCCATTCGATGAGGGCATGCTTTTATCTCCATGGTGGTGA 3006 0.3999 MANLSNLKDVVELEEDEEEDEFESFSYAMQLSTSITLSMALQTAAEIGIFDVLQKAGKGAPLSAHDIVSRISFNNINNPEEAARMLDRILALLTSHSILNCSILQDQQKLGYTMAPVARFFAPNSDGVSLAPLLALTNDKIYLDVWSQFNDAIREGGNSFKMVHGADIFEYCRLDSRFNKVFNRAMMNHSTIVMKKVLECYKGFEEVKRVVDVGGGVGMSINMITSKYPHIKGINFDLPHVIQHAPSYPGVEHIGGDMFQSVPNGDVVFMKWILHDWSDEYSLKLLKNCYDAIPDDGKAQDCFGFNGGWIVQLHLLLYPKYTRVYCCYHHRMDPTSATLPCLALFNEDLVRLLQLLSVPPSSSIAIQFSHSLLSHNPATSVEGMPVVLDISSDEDEGLKEGPKNSDLEWIQELLFNSDDEESNADSDDVVILHETKPQQHFKSKAISTLSVNDGDDDDDDCVVLEGDPENGVTSVDDEGANGSDELLVVGEKGQVACRDYPHARHLCAKFPFSSTPHEKHCGQCHCYVCDSLAPCLKWGTGILNTDHCHANDKTDMWKVQRKDFRRTQSSPLPASTNYGTSHGVVRSQRFENLPRDINHLSPNSVLRKQPSRSTVMHTPSSLNSISQNQVSRPKSTYAHYSLSSGTQNPIVRSINIPVSRTATNLTIPNGANHGSRYVQPRSTLARDRSRPHSVQLLGVRSHAIQKERERVAISLRPQFLRSPMMSKGVVGRTMGDTLAVNHMSHGSSCFNNHVNAVHQHDKFHTATGFSNPINCNGPGDVCPSINLSTFSDSISGPVSLSCVNQCTVTPETQVYGQTLSQPNDSLNFRQTCIQGNDAPYVACLNSNQHGNDIQIKSQDESANGNITHSGITSQDTFQPKAHEEIPNITSSAEGVSAFDSSWAAKTNQSIELLVEGSALQSSGSIDQSSNVENSSTDQFTGNIEPQNESFHIPSSMVDIENWLLGKDSSQMGTDDVLSFEMNIPSPDPSPFDEGMLLSPWW 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00068 1001 Coils Coil 1 21 - -
Car04g00068 1001 Gene3D Vaccinia Virus protein VP39 123 300 IPR029063 -
Car04g00068 1001 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 377 IPR016461 GO:0008168
Car04g00068 1001 Gene3D - 6 121 IPR036388 -
Car04g00068 1001 MobiDBLite consensus disorder prediction 595 632 - -
Car04g00068 1001 PANTHER ZGC:112980 384 980 - -
Car04g00068 1001 SUPERFAMILY "Winged helix" DNA-binding domain 19 124 IPR036390 -
Car04g00068 1001 Pfam O-methyltransferase domain 146 298 IPR001077 GO:0008171
Car04g00068 1001 PANTHER - 384 980 - -
Car04g00068 1001 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 299 IPR029063 -
Car04g00068 1001 Pfam Dimerisation domain 39 94 IPR012967 GO:0046983
Car04g00068 1001 MobiDBLite consensus disorder prediction 597 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00068 Car-Chr4 719684 732476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00068 23 299 Monolignol Biosynthesis Gene Families AT5G54160 51.429 2.54e-95 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00068 K13066 - mtr:MTR_1g069440 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00068 04 719684 732476 Car04g00068 04 719684 732476 ECH