Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00062 ATGTCAacttcacttttcatcctcttcactttccttcacttcCTGCTTTACTCTTCCTCAGCGAAGTTGGTTTCTAAGAGTCTGTCATTTGCTTCATCTGAACGAGCTAAAGTGTGGTTTGTTAAACCTTCTTCTGGGCCATCTCCATCTTTTCAAGGTCCCAGTGTGACTCCAGGACCAGAAAAACATCCTCGTCATCGCCATCAATACCATGGTGCAAAGCCTTATTCCGGGGCTCCCTCCCCTTCTGAAGGCCAAGCATGTGGTCAAAGCTGTAAGGATCCACTCACAACAACTCCCCTTGGTTCACCTTGTGGTTGTGTATTTCCCATGAAAGTCAGACTTTTACTGGATGCAGCTCCTCTGGTTGTTTTTCCGGTAATTAATGAGTTAGAGATTGAACTTGCATCTGGAACATATTTGAAGCAAAGCCAGGTCAGGATAATGGGTGTCAGTGCTGACATTCAAAATCAGGAAAGAACCATAGTTGATATTAACCTGGTTCCGCTTGGTGAAAAGTTTGACAATACAACTGTGGTTCTAATATACCAAAGATTTTGGCACAAGAAAGTTCCTCTAAATAGGTCTCTTTTTGGTGATTACACAGTCTTGTGCACTACTTATCCAGGGATGCCGTCATCGCCGCCACAGGGAACCTTAACTGGGAGTGGTCCCCGTCCCAGTGGAAGTGCTTCAGGTCTTCTCCCAATCACTACCACCTTTATCAGCAGCAGCAAGAACGATAAAATGAAACTTAGAACCATAATCATCATTGCTGTATCTTCCATTTTTCTCTTACTGGTTTTGGTTGGAGCATTTTCCATCATTTTTAAATGGAGGAAAATTAGGAGACCATCAAGTGCAGTTGGTCTGCCATTCCCATTGTCTCAAAACAAGAGATATGCCATGGGGTCTATATTGTCTAGAAGAATTACAAGTCCAGCATCAGTGTCCCATATGTCCACCATGGATGCTTCAGCTCTTTCTGTGAAAACATTTTCCCTTTCTGAGATTGAGAAAGCTACAGATACATTCAGTTCACAAAGAGTATTGGGAGAAGGAGGATTTGGGCGTGTTTATCATGGGACATTGGATGATGGAACTGATGTTGCAGTTAAGCTACTAACAAGGGATATTCAAAGTGGAGACCCTGAATTTATTGCGGAAGTTGAGTTGCTATGTCGTTTGCATCATCGCAATCTTGTGAAACTCATCGGCATTTGCACAGAAGGGCACAAACGATGCTTGGTGTATGAGCTTGTTTGCAATGGTAGTGTCGAATCTCATTTGCATGGCGTTGACCAGAGAAGTCACCCGCTAGATTGGGAAGCACGGAAAAAAATTGCCCTTGGAGCGGCGAGAGGATTGGCCTATCTTCACGAGGATTCTATTCCACGCGTAATCCACAGAGACTTCAAAGCTAGCAACGTGTTGTTGGAAGATGACTTTACTCCCAAGGTTTCTGATTTTGGATTAGCAACAGAAGCAACTGAAGGAAGTCGTTCTGTTCCTACAAGGGTCATGGGCACTTTTGGGTATGTTGCCCCAGAATATGCAATGACAGGCCATTTGCTCGTTAAAAGTGATGTTTATAGTTATGGTGTTGTGCTGCTTGAACTTCTAACAGGCCGAAAGCCGGTGGACATATCTCAACCTCTTGGAGAGGAGAATCTTGTTCTATGGGCACGATCACTGTTAAAAAGTAGAGAGGGTTTAGAGCAGCTTGTGGATCCGACATTGGCAGGAAGTTATGACTTTGATGAAATGGCAAAGTTTGCTGCAATTGCTTTAATGTGTGTACAACGGGAGGTCACTGAGAGACCCTTTATGGGTGAGGTTGTGCAGGCTCTTAAGTTGATATACAATGACAAAGATGAGACCAGTGTGGATTGCTTGAGTCGGAAGGAATCTTCTGCTCAAGAGTCTGAGTTTAGTAGTTGGTGGAATGATGAGCCTGAAGATATTACATGTCGACTAGATTTTAGGCAAGCATCTTCATTCATCACAATGGATTACAGTTCAGGTCCACTTGAAGAACTGGAAAACAGAGAGTTTTCAGCTTCAAACTTGATGGGAAATGATATGTTTTTACCAATCAGACTCGGTAATAGATCAGGTCCCTTGAGAACAGCCCGAAGAAGCAACCTATCCTTTAATAGGTTCATTGGAAGTCAGAGTGAACATGCAGTATTTCCTTCCAAGCGTGTTTGGAATGAGGGTTACTGGCCTTGA 2232 0.4279 MSTSLFILFTFLHFLLYSSSAKLVSKSLSFASSERAKVWFVKPSSGPSPSFQGPSVTPGPEKHPRHRHQYHGAKPYSGAPSPSEGQACGQSCKDPLTTTPLGSPCGCVFPMKVRLLLDAAPLVVFPVINELEIELASGTYLKQSQVRIMGVSADIQNQERTIVDINLVPLGEKFDNTTVVLIYQRFWHKKVPLNRSLFGDYTVLCTTYPGMPSSPPQGTLTGSGPRPSGSASGLLPITTTFISSSKNDKMKLRTIIIIAVSSIFLLLVLVGAFSIIFKWRKIRRPSSAVGLPFPLSQNKRYAMGSILSRRITSPASVSHMSTMDASALSVKTFSLSEIEKATDTFSSQRVLGEGGFGRVYHGTLDDGTDVAVKLLTRDIQSGDPEFIAEVELLCRLHHRNLVKLIGICTEGHKRCLVYELVCNGSVESHLHGVDQRSHPLDWEARKKIALGAARGLAYLHEDSIPRVIHRDFKASNVLLEDDFTPKVSDFGLATEATEGSRSVPTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDISQPLGEENLVLWARSLLKSREGLEQLVDPTLAGSYDFDEMAKFAAIALMCVQREVTERPFMGEVVQALKLIYNDKDETSVDCLSRKESSAQESEFSSWWNDEPEDITCRLDFRQASSFITMDYSSGPLEELENREFSASNLMGNDMFLPIRLGNRSGPLRTARRSNLSFNRFIGSQSEHAVFPSKRVWNEGYWP 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00062 743 Gene3D Transferase(Phosphotransferase) domain 1 421 643 - -
Car04g00062 743 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 7 739 - -
Car04g00062 743 CDD STKc_IRAK 351 620 - -
Car04g00062 743 SUPERFAMILY Protein kinase-like (PK-like) 330 621 IPR011009 -
Car04g00062 743 ProSiteProfiles Protein kinase domain profile. 345 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00062 743 Gene3D Phosphorylase Kinase; domain 1 316 420 - -
Car04g00062 743 PANTHER OS01G0750732 PROTEIN 7 739 - -
Car04g00062 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Car04g00062 743 Pfam Protein tyrosine and serine/threonine kinase 347 616 IPR001245 GO:0004672|GO:0006468
Car04g00062 743 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Car04g00062 743 MobiDBLite consensus disorder prediction 44 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00062 Car-Chr4 667196 672669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00062 92 626 Receptor kinase-like Gene Family AT5G56890 56.752 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Car04g00062 PK_Tyr_Ser-Thr 2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00062 - - gmx:100792309 1019.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00062 04 667196 672669 Car04g00062 04 667196 672669 ECH