Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00052 ATGCACTTACATAGAATAGACCAAGAAATGTCCAAAGCAAAAAAGTCCAAGCACAATCCACCAAATGTAGTTGCCAAATTAATGGGCCTTGAAACCCTTCCAGTTGGAGAATCTAATTCTCAAAACATGTATGATCATTTAGGGTGGCCATTGAAACATTGGCAGCTAGAAAATAGATTAAAGATGATGAACAGAGATGGATATGAAACATGGCTGCAATTTGAGAGAGCATGCAATATGAAGGAAGATGTTGATGAGGGGAAAATGGCTCTCATTCGTCAGAAATTCGTCGAAGCGAAGCATCTGTCAACCAACGAGAGACTGCGCCAATCGAAGCAATTTGAAAATGCCTTGGATGTTTTAAGCTCTAATAATGATCTCTTGGTCAGGTTTTTGGATTCACAAAAGCCTTATCAGCCTCCCTCTACTCCACCGGACGACGCAAAACGCATTACCCTTATCAAACCTCTAAAGATGTTTGGCAATGACAATTCTTCCGAAAAGGGTAAGAAGAATGATAGATTGCTTAAGAAACAAGCAAATTCTGATCAAGAAAGTCAGAAATTTGATGAGTTCTCAGTTCAATCTACTAGAATTGTTGTCTTGAAGCCTAGTCCTGGAAGAACACATGATCTTAAGGATTTTGTTTCTCCAACAAATCCATCACCTCAAAGTTTCTATCAAAGAACTAGAGATGATAATGTAATTGAATCTATAAAAGTGGCTAAAGAGATTACACTGGAAATGCATGAAGGACTAAAGAGCTATCAGAAGGATAAAACTTTACATTCTTCAGTATTTTCCAGTGGCTATTCTAGCAATGAAAGCTCGTTTAATAAGTCATATCATGAGTTTGCAGAAGGGAATCTCAGTAATTTGGAAGCTTTGTCATCAATGGGAAGGCATTCATGGGATTGCATCAATGTATGTGGCAGTCCTTATTCTACACAGTCCTTGGGTCGTGCATCGTGTTTTCCCGAGTCGTCATCGGTGTGTATAGAGGCGAAGAAACGGCTTTCTGAAAGATGGAACATGATAACATCTAATGATAAAGGTCATCAAGAACAAAGGTATGAGAAGAGAAACTCTACTTTGGGTGAGATGCTTTCTCTGTCACTTGTAAAGAAATCTGTAACATCTTCTGAGGTTGAGAGTACTGATAAAGACCAAGAAGAACCATGCAAATATATTTCTTGCAGCCAATCTTTCAATGATGAAATGATGAGCGTTGATGTTTCTACTCAAAATGTTTCTGGGTCGAATTCTTTCGTAGACAGTAGAAGATGCAGGGACAGGAATATTGTTCCTGCACCTTCTACTTTCTATGAACTTTGCCTCAGTGTTGATGCTGACATAGAAAATGGATCCAAGGTGCTGGAAAAATCAAAGAGTAATAAGAGATCATCATTTAAAGGGAAAGTTGCTAGTTTCTTGTTTTCAATGAGTAAAAAATCAACCAAGAAAAAATCTAGTTCATCTCAATCTAAAGATGAATCCGAAACTACTGTCGCCAAAACATCGGTTCCATCAGTAAATTCACCTAGAGTCCTTGGAGATAATGTGTCTCAAATCTTCAATGTTGGTGGATTTGAAGAGTATCTTGCAGCTCAATGTGAATCATCAGGCACAACAGATTCAGTCTCTAGTGGACAACAAGAAGACATGATTACACTAGAGCCTGGATTGCCTGAGTCAAACCCCCTAGGGCCAGAGATTTCAAATGAAAAACAGGATAGGCCAAGTCCAATCTCAGTGTTAGAATCTCCATTTGAAAATTACAATACAGCTCAAGAGTCCTTGGAATGCATGCAAGGTGGTCACATGGGATCATTGGTGTCTCTGAAATCCAATTTAATTGACAAATCACCACCAATAGAATCAGTGGCTAGGACACTATCATGGGATGATGATTCGTGTGGAGAGTTAGCAACTCCTTATTATCCATCAAAACCTATAAGAGCTACTTCCTTAGACAACAAGTTAGAGGAAAATGAATGGCTTCTCTTGGTTCAAAAACTACTATCAGCATCTGGACTTGACAATCAACAACATTATGACTCATTTCACACAAGATGGCATTCATTTGAAAGCCCATTGGACCCATCATTGAGGGATACATATGCCAACATTAATGAAAAGGACACTCAGCCACTCAATGAGGCTAAGAGAAGGAAGATTAGATCAAATCAGAAGCTTGTGTTTGATTGTGTTAATGATGCAATATTGGAAGTTGTTGGATATGGGCCAGATAATTACTTCAAGAAGATGTGCAGTGGGACCCACAATAGGCCCTTAGTCCAAGAGGGTTCATGTTTGGTGGACCACATAGTGACCCAAATGAAGGAATTAATAATAGCAAATAATGGGATGAGGTTTGTTTTGGAGGAATGTGGTGGGGACAGTCACAGCCTGGTTGTAGAAAATGTTGTTAGGAAAGAGGTTGTGCAGTTAGGGTTGGTTGAGGTTACGAGAATGGAGATTGATGTTTTGGGGAGGGAAATTGAAGGAATGATTATAGAAGAAATTGTGGAGGATGCTGTGTTTGATTTTAATGGCAAATGA 2562 0.3899 MHLHRIDQEMSKAKKSKHNPPNVVAKLMGLETLPVGESNSQNMYDHLGWPLKHWQLENRLKMMNRDGYETWLQFERACNMKEDVDEGKMALIRQKFVEAKHLSTNERLRQSKQFENALDVLSSNNDLLVRFLDSQKPYQPPSTPPDDAKRITLIKPLKMFGNDNSSEKGKKNDRLLKKQANSDQESQKFDEFSVQSTRIVVLKPSPGRTHDLKDFVSPTNPSPQSFYQRTRDDNVIESIKVAKEITLEMHEGLKSYQKDKTLHSSVFSSGYSSNESSFNKSYHEFAEGNLSNLEALSSMGRHSWDCINVCGSPYSTQSLGRASCFPESSSVCIEAKKRLSERWNMITSNDKGHQEQRYEKRNSTLGEMLSLSLVKKSVTSSEVESTDKDQEEPCKYISCSQSFNDEMMSVDVSTQNVSGSNSFVDSRRCRDRNIVPAPSTFYELCLSVDADIENGSKVLEKSKSNKRSSFKGKVASFLFSMSKKSTKKKSSSSQSKDESETTVAKTSVPSVNSPRVLGDNVSQIFNVGGFEEYLAAQCESSGTTDSVSSGQQEDMITLEPGLPESNPLGPEISNEKQDRPSPISVLESPFENYNTAQESLECMQGGHMGSLVSLKSNLIDKSPPIESVARTLSWDDDSCGELATPYYPSKPIRATSLDNKLEENEWLLLVQKLLSASGLDNQQHYDSFHTRWHSFESPLDPSLRDTYANINEKDTQPLNEAKRRKIRSNQKLVFDCVNDAILEVVGYGPDNYFKKMCSGTHNRPLVQEGSCLVDHIVTQMKELIIANNGMRFVLEECGGDSHSLVVENVVRKEVVQLGLVEVTRMEIDVLGREIEGMIIEEIVEDAVFDFNGK 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00052 853 MobiDBLite consensus disorder prediction 496 513 - -
Car04g00052 853 MobiDBLite consensus disorder prediction 1 20 - -
Car04g00052 853 Pfam Protein of unknown function (DUF3741) 93 134 IPR022212 -
Car04g00052 853 Pfam Domain of unknown function (DUF4378) 670 845 IPR025486 -
Car04g00052 853 PANTHER DUF3741 FAMILY PROTEIN 6 853 - -
Car04g00052 853 MobiDBLite consensus disorder prediction 1 16 - -
Car04g00052 853 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 6 853 - -
Car04g00052 853 MobiDBLite consensus disorder prediction 557 581 - -
Car04g00052 853 MobiDBLite consensus disorder prediction 487 513 - -
Car04g00052 853 Pfam DUF761-associated sequence motif 19 34 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00052 Car-Chr4 568644 573239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00052 6 850 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 33.740 4.69e-119 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00052 - - mtr:MTR_1g069190 1039.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00052 04 568644 573239 Car04g00052 04 568644 573239 ECH
Car03g02387 03 69798991 69804933 Car04g00052 04 568644 573239 PCT