Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00040 ATGGCAGACTCCACTCCAACCGCACCTACTTGCGCATACTCTTGTTTCCAAAGAACGGTTACTTTATACGATTGGTGGCTTGTTAAATCCCTAAACGACTTCCAAGGAAATCGTTTAGCCGTCGCTGGTGTCTCTTCCAGAAAGGGAGAAGCGGTTCGGGTGTTTATTTCGGCTCCCATTGTCAAAAGATATGATGTGTTTTCCCTTGAGACTGCCGATGGTATATATGTTATCATCAGGGGTTTCATCAACGAGCAGCGTGCACTGGATAATGGTATTCCTCCGCAGGTTTTCAATGGTTTTTTATTTGGCTTTCCTCCAAATTGGGAAAGCTATGCTCTAGATTGCTTCAGAGAAGAATCAGAAGCTGGTACTGATCTGGTTGATGCTGTTCTGGATAATGCATGTCCAAGTTGTCAAGAAATATTGGCTGATGGCGAGGAAAAATCTGTTCCTACTTCGTTAGTGTTGCCTGAAGAGGCCTCAGGAAATTGCGAGAAACCATTCCCTGGAGACGAATGCATAGTTTCAAAGGAGATGAGTGAGGTTGATGTTGCTAATGGTAGTGGTAGAAATAGACGTAGTACTATGTTGCATAATATCAAAGCCTGTCAGCAGAAGCAGCATGTGTTTGGAAGTCCACTCAAGCATCCAGATAAAGAGCAGAGCTCTACCTCGGACGCCATAGAGAATCGTGACTTGAATATTGCTGTTCCTGATAATGTACCAGCAACTTGTCCAGAAATATCATCTGATGGCGTGGAAAAGTCTTTTCCTATTTCTCTGATATCACAGGAAAATACCACAAGAGTTTGCAAGGAGTCATTCCTTGAAGATGGACAAGATATGTCAATTAAGTTGAGTGATGTTAATGTTGTTCATGGTAGTGGTAGAAATGGACGTAGTGCCCGGTTGCATAATGATAAAGTCTGCCAGAAGAAGAAACATCCTGCTTCTGGAGGTCCTCCCAAGAACCCAGATAAAGAGCAAAGCTCTACCTCAAAGGCAATGGAAAATTGTGATTCAGATACTGCTGTTCTTAATAATTTATCAGCAATTCTTCCAGAAATATCATCTAACGACTTGGAAAAGTCTTTTCCTATTTCTTTGGTAACATCGGAAAAGATCACGGGAGATTGCAAGGAGTCATTCCTTGACAAAAAACACGATATGTCAATTAACATGAGTGACGTTGTTCACGGAAGTGGCAGGAATACACGTAGTTCCCGGCTGCATAATGTTAAAGTCAGCCAGAAGAAGAAACAGCCTGCTTCTGGAGGTCTTCCCAAGCACCCAGATAAAGAGCAGAGATCTACCTCAAAGGTCATGGAAAATCGTGATTCGGATACTGCTGTTCCTAATAATGTATCAGCAAATCTTCCAGGAATATCATCTGATGGTGTGGAAAAGTCTTTTCCTACTTCTTTGGTAACACCAAAAAAGGCCAAGGGAGATTGCAAGGAATCATTCCTTGAAGATAAACACAATATGTCAATTAAGATGAGTGAGCTTAACGTTGTTCATGGAAGTGGTAGAAATAGACGTAGTGCCCGGTTGCATAATGTTGAAGTCAGCCAGAAGAAGAAACAGCCTGCCTCTGGAGGTCCTCCCAAGCACCTTGATAAAGAGAAGAGCTCTACCTCAAAGGTCATGGAAAATTGTGATTTGGATATTGGGGTTCTTAATAGTGTATCAGTGAATCTTCTGGAAATATCATCTTATGGTGTGGAAAAGTCTTTTTCTAGTATTCCTACTTCTTTGGTAACACCGGAAAAGACCACCGGAGATTGCATGGAGTCATTCCTTGAAGATGAACACAATATGTCAATTAAGATGAGTGAGGTTAATGCTGTTCGTAGTAGTGGCGGGAATAGACGTAGTGCCCGGTTGCGTAATGTTAAAGTCTGCCCGAAAAAGCAGCCTACTACTGGAGGTCCTCCAAAGCATTCAGATAAAGACCAAATCTCTGTCTCAGCAGCCATGGAGAAGAGTGATGGAGGGCTGGAAAGTCCATCGACACCCCTTCAGTCACAATCAAAGGGGGCAGTAAACATACTGTCTGAGCAGGTCAATAATAAATTCGCATCCAGAATTTCTAAAACTTTGTCAGCAAAAACTGAAGGATGTTATAAGAAAAAAAGGGTGACAGTTGAAACAGAAGCAGTCAGACCTAAGAGAAAAATGATGAGACCTGCATCTTCTATGAAATCTCCACAAGAAAAGGATGCAAGTCACTTGAACAAGGGAAGTAAACAGAGATTGTCCTCAGTTACTCCAGAGTCATTGAGTCTAAAAAAATCTAGATCTGGAAGATTACTTCTACCTCCTTTGGAGTTTTGGCACAATCAGAAACCTATTTATAATGTGGACCGTGAGATTACAGAAATTCAGGCAGGCTCGTCTTTAATATCACCTTTTCGAGGCTTTTCACCATCATTGGGCAGGTGTGCAGAAATTATGAGAGGAGGTAAAAGGATTGTACTGGAACCAATGCAGAAACTATAG 2505 0.4188 MADSTPTAPTCAYSCFQRTVTLYDWWLVKSLNDFQGNRLAVAGVSSRKGEAVRVFISAPIVKRYDVFSLETADGIYVIIRGFINEQRALDNGIPPQVFNGFLFGFPPNWESYALDCFREESEAGTDLVDAVLDNACPSCQEILADGEEKSVPTSLVLPEEASGNCEKPFPGDECIVSKEMSEVDVANGSGRNRRSTMLHNIKACQQKQHVFGSPLKHPDKEQSSTSDAIENRDLNIAVPDNVPATCPEISSDGVEKSFPISLISQENTTRVCKESFLEDGQDMSIKLSDVNVVHGSGRNGRSARLHNDKVCQKKKHPASGGPPKNPDKEQSSTSKAMENCDSDTAVLNNLSAILPEISSNDLEKSFPISLVTSEKITGDCKESFLDKKHDMSINMSDVVHGSGRNTRSSRLHNVKVSQKKKQPASGGLPKHPDKEQRSTSKVMENRDSDTAVPNNVSANLPGISSDGVEKSFPTSLVTPKKAKGDCKESFLEDKHNMSIKMSELNVVHGSGRNRRSARLHNVEVSQKKKQPASGGPPKHLDKEKSSTSKVMENCDLDIGVLNSVSVNLLEISSYGVEKSFSSIPTSLVTPEKTTGDCMESFLEDEHNMSIKMSEVNAVRSSGGNRRSARLRNVKVCPKKQPTTGGPPKHSDKDQISVSAAMEKSDGGLESPSTPLQSQSKGAVNILSEQVNNKFASRISKTLSAKTEGCYKKKRVTVETEAVRPKRKMMRPASSMKSPQEKDASHLNKGSKQRLSSVTPESLSLKKSRSGRLLLPPLEFWHNQKPIYNVDREITEIQAGSSLISPFRGFSPSLGRCAEIMRGGKRIVLEPMQKL 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00040 834 Pfam SANTA (SANT Associated) 20 112 IPR015216 -
Car04g00040 834 MobiDBLite consensus disorder prediction 504 548 - -
Car04g00040 834 MobiDBLite consensus disorder prediction 293 337 - -
Car04g00040 834 MobiDBLite consensus disorder prediction 718 762 - -
Car04g00040 834 MobiDBLite consensus disorder prediction 301 315 - -
Car04g00040 834 MobiDBLite consensus disorder prediction 396 483 - -
Car04g00040 834 MobiDBLite consensus disorder prediction 534 548 - -
Car04g00040 834 MobiDBLite consensus disorder prediction 426 444 - -
Car04g00040 834 MobiDBLite consensus disorder prediction 398 412 - -
Car04g00040 834 MobiDBLite consensus disorder prediction 618 678 - -
Car04g00040 834 PANTHER MIS18-BINDING PROTEIN 1 3 811 IPR039110 -
Car04g00040 834 MobiDBLite consensus disorder prediction 445 472 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car04g00040 SANTA 1.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00040 - - cam:101500947 1610.51