Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00031 ATGGCGGCTTCGCGGCGGCTCCGAGAGCTGCAATCCCAACCCGGTAACAAGATCTGTGTCGATTGCTCTCAGAAGAATCCACAGTGGGCATCAGTATCCTACGGCATCTTCATGTGCCTTGAATGCTCCGGTAAGCACCGTGGTCTCGGCGTTCACATCTCCTTCGTCCGATCTGTTACCATGGACGCTTGGTCCGATATCCAAATCAAAAAAATGGAAGCCGGTGGTAACGACAATCTCAACGCCTTCCTCGCACGCTATTCAATTTCAAAGGAAACCGATATCATAACGAAGTATAACACCAACGCTGCTTCCGTTTACCGTGATAGGATTCAGGCGATTGCTGAAGGTCGTTCATGGCGCGATCCGCCTGTTGTTAAGGAGAATGTTGCTGCCGGAAAGGGGAAGCCGCCGTTGTCGCAGAATCGTCGGAGTAACGATTCCGGTTGGGATGATTGGGATGGAGAAGGAGGTTCTGGAAATTCTGTTGATGTGAGGAGTAAGTCGACGGGAGATTTCAGAAGCTTGAATGGGGGTGGCGCGCCGGTGAGATCGAGATCGACAGAGGATATTTATACTCGTTCGCAGTTGGAGGCTTCTGCGGCGAATAAGGAGGGTTTCTTCGCGAGGAAGATGGCGGAGAATGAGTCGCGACCGGATGGACTTCCACCGTCGCAGGGTGGGAAGTATGTTGGGTTTGGATCTAGTCCCGCGCCTTCGCAGAGGAGTAATCCTCAAAACGACTATTTCTCTGTCGTTTCTCAGGGTATTGGTAAGTTGTCATTGGTTGCTGCCTCTGCTGCTAATGTTGTTCAGGCTGGCACAAAAGAGATCACTTCTAAGGTCAAGGAAGGTGGTTATGATCAAAAGGTCAACGAAACTGTCACCGTCGTCACTCAAAAGACATCAGAGATTGGTCATAGGACATGGGGTTTAATGAAAGGGGTCATGGCTCTGGCTTCACAGAAGGTTGAGGAGTACACTAAAGAAAACTCAAATTGGAAGGCTGATAGCTGGCAACGAAATGAGAATGATAGAAATGGCTACTATCAAGATTTCAATCAAGAGACCAAAGGCGGTAGTTCTTCTACTGGAAGAGAACAATCTTCATCGGGGCAATTCAAAACTCATAGCTCAAACTCTTGGGATGATTGGGACCAAAAAGATAGTTGGAAGGAAGAACCAACTAAAGGATCAACTCGCTATTCATCTGGTGTGCAGGTTGGTACTCACAATCCAAGCTCTTGGGATGATTGGGACCACAAAGATTCTAGGAAGGAAGAACCAGCCAAAGGATCAGCTCCCCATAATAACGATGCTGGTTGGGCTGGCTGGGATAATGCTAAAGATGATGGATTTGACAACTTTTATGAAGGTGCATCTAATAAGAAATCTGCTGGACGTAATGGGAAATCTGATGATGCTTGGACGGGGGGTGGCTTTCTCTAA 1449 0.4817 MAASRRLRELQSQPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDAWSDIQIKKMEAGGNDNLNAFLARYSISKETDIITKYNTNAASVYRDRIQAIAEGRSWRDPPVVKENVAAGKGKPPLSQNRRSNDSGWDDWDGEGGSGNSVDVRSKSTGDFRSLNGGGAPVRSRSTEDIYTRSQLEASAANKEGFFARKMAENESRPDGLPPSQGGKYVGFGSSPAPSQRSNPQNDYFSVVSQGIGKLSLVAASAANVVQAGTKEITSKVKEGGYDQKVNETVTVVTQKTSEIGHRTWGLMKGVMALASQKVEEYTKENSNWKADSWQRNENDRNGYYQDFNQETKGGSSSTGREQSSSGQFKTHSSNSWDDWDQKDSWKEEPTKGSTRYSSGVQVGTHNPSSWDDWDHKDSRKEEPAKGSAPHNNDAGWAGWDNAKDDGFDNFYEGASNKKSAGRNGKSDDAWTGGGFL 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00031 482 CDD ArfGap_ArfGap1 3 117 - -
Car04g00031 482 MobiDBLite consensus disorder prediction 330 482 - -
Car04g00031 482 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 401 - -
Car04g00031 482 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 400 482 - -
Car04g00031 482 Gene3D Arf GTPase activating protein 1 131 IPR038508 -
Car04g00031 482 MobiDBLite consensus disorder prediction 124 190 - -
Car04g00031 482 Pfam Putative GTPase activating protein for Arf 5 108 IPR001164 GO:0005096
Car04g00031 482 SUPERFAMILY ArfGap/RecO-like zinc finger 5 111 IPR037278 -
Car04g00031 482 ProSiteProfiles ARF GTPase-activating proteins domain profile. 4 120 IPR001164 GO:0005096
Car04g00031 482 MobiDBLite consensus disorder prediction 415 433 - -
Car04g00031 482 PRINTS HIV Rev interacting protein signature 16 35 IPR001164 GO:0005096
Car04g00031 482 PRINTS HIV Rev interacting protein signature 35 52 IPR001164 GO:0005096
Car04g00031 482 PRINTS HIV Rev interacting protein signature 56 77 IPR001164 GO:0005096
Car04g00031 482 MobiDBLite consensus disorder prediction 333 380 - -
Car04g00031 482 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 400 482 IPR044519 GO:0005096|GO:0016192
Car04g00031 482 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 401 IPR044519 GO:0005096|GO:0016192
Car04g00031 482 Coils Coil 317 337 - -
Car04g00031 482 MobiDBLite consensus disorder prediction 381 396 - -
Car04g00031 482 MobiDBLite consensus disorder prediction 214 246 - -
Car04g00031 482 SMART arf_gap_3 4 120 IPR001164 GO:0005096
Car04g00031 482 MobiDBLite consensus disorder prediction 397 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00031 Car-Chr4 329619 333824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00031 5 83 C2H2 Transcription Factor Family AT4G05330 51.250 1.09e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00031 K12492 - gmx:100792658 774.622