Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00021 ATGACAATCATGATGGAGAGGCAGCATAGAAGAAATTGTATAGAAAAAATAATGCCATTCATAGCTGTATTGTTTTTGCAATTTGGATATGCAGTTATGGATGTTCTATCAAAGGCTGCATTGAACAAAGGAATGAGTAACTATGTTTTTGTCGTCTACCGTCACGCCGTTGCATTCATCGTCGTAACTCCTTTTGCACTCTATTTTGACAAGAAAGTAAGGCCCAAAATGACTATTTCAATCTTCATAAAGATAGTGGCACTAAGTTTGCTAGAGCCAGTAATTGATCAGAATTTGTATTTTTTGGGGATGAAATTCACAACGGCAACCTTTGCAGCTTCCATGAGCAATATTCTTCCTGCTATTACGTTTATATTGGCTTCTATTCTAAGGATTGAGAAGATAAAGATAAGAAGTATACGAACTCAAGCAAAAGTGGTGGGAACTATAGCAACCGTTTCAGGTGCAATGGTGATGACACTAATTAAAGGGCCAGTACTTTTTGGGACATTTGGAAGTGATTCTCAAAACCATCATAATAGTGGCATAAGTACTCAACATACAATCATTGGAGCTGTGATGATCACATTAGGATGTTTTAGTTGGGCTTGTTTTATAATCCTCCAAGCTATTACCCTTGAAACCTACCCTGCAGCACTTTCACTATCGTCATGGATATGTCTATTGGGAACATTAGAAGGTGCAGCAGTTGCTTTGGTTGTGGAAAGAGGCAATTATTCAGTTTGGTCCATAAAATGGGATGTGAGATTGTTGTCAGCTATTTACACGGGCATATTCTGCTCAGGGCTAGGTTATTATTTACAAGGAGTAGTGATGAAAACTAGAGGCCCAGTGTTTGTCACAACATTTAATCCTTTGTGCATGGTTATTGTTGCTATCATGGGATACTTCATTCTTGCCGAACAAATGTTCCTTGGAAGGGTGGTGGGTGCATTTATCATTTGTTTGGGTTTGTACCTTGTTGTGTGGGGAAAAAGCAAAGATTACAACAGCCCATCAAAATCAAATATTGAAGAACCTGTTTTACCGAATTAG 1056 0.3826 MTIMMERQHRRNCIEKIMPFIAVLFLQFGYAVMDVLSKAALNKGMSNYVFVVYRHAVAFIVVTPFALYFDKKVRPKMTISIFIKIVALSLLEPVIDQNLYFLGMKFTTATFAASMSNILPAITFILASILRIEKIKIRSIRTQAKVVGTIATVSGAMVMTLIKGPVLFGTFGSDSQNHHNSGISTQHTIIGAVMITLGCFSWACFIILQAITLETYPAALSLSSWICLLGTLEGAAVALVVERGNYSVWSIKWDVRLLSAIYTGIFCSGLGYYLQGVVMKTRGPVFVTTFNPLCMVIVAIMGYFILAEQMFLGRVVGAFIICLGLYLVVWGKSKDYNSPSKSNIEEPVLPN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00021 351 PANTHER WAT1-RELATED PROTEIN 13 347 - -
Car04g00021 351 PANTHER WAT1-RELATED PROTEIN 13 347 IPR030184 GO:0016021|GO:0022857
Car04g00021 351 Pfam EamA-like transporter family 21 158 IPR000620 GO:0016020|GO:0016021
Car04g00021 351 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020|GO:0016021
Car04g00021 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 159 - -
Car04g00021 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00021 Car-Chr4 223161 227322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00021 5 346 Nodulin-like Gene Family AT2G37460 64.620 7.64e-167 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00021 - - cam:101496299 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02416 03 70071533 70074356 Car04g00021 04 223161 227322 PCT