Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00016 ATGGACAAAATCAAATCTCATCGCACCAATTCCAAACTTCATCTTCCTCAAGGGAACGAGCAGATTCATAGACAGCGACAATTTCCCGATTTATCTCCTGATTCTAGCTCTTCCAGTGGTGGGGTTGCAGAGAAAGATTCGTTCTCATTTAAATTTGGGTGGAAATCTTCTAAACAATCTGTTGGAACTCCTATTAAGAAGTTATTAGCTGAAGAGATGTCGCCAACAGCCGAATCCAAGAGAAGATCCCCTGGTGTTATAGCCAGATTGATGGGTCTTGATGGGCTTCCATCTCAGCAGCCTACTAATAAACAGCACAAAGATCCACAGAAGGCAATGCTGTCAGAGAAAACTCGAAGCAGGGGCATGGCAAATGATGGCCGATCATCTAGGAGAAGCTCAAGAGATCAGCAAGAATTCAAGGATGTATTTGAGGTCTCAGAGATCCCAAAGGCAGAGAGTGGTAGGTATTCATCTGCAGATTTGAAGGTCAATGAAGCTGAAATGTCATTCATTGAGCAGAAGTTCATGGATGCCAAACGCCTTGCAACTTATCAGGATTTTCAGTCTTCAAAGGATTTCCATGATACACTTGAGGTTTTGGACTCTAACAAGGATCTTCTGCTAAAGTACTTTAAGCGGCCAGATTCTTTGTTCAAAAAGCATTTGAATGATCTGCAGGCTACCCCTCTCCAATCACATTCCGGTCATATAGAGCCTACCAATATTGAGAACTTTGAACATGATTTCACTTGGAGGTCGGATAGGGAGACAGCACAGTTGAATTACAAAAGATTTCATCAGAAGCATCCCAATGGTCATCCTTGCCAATTTGACAAAAGGCGCGTGATGCATAATTCTCCAAGATCATCAAAGCACCACTTTAAGGGTAGCCATGAACAAGGTGCAGTTGCAACAAAGATTGTTGTACTAAAACCTAATATGGGAAAGTTGCAGACTGGTACAAGAATTGAATCATCACCTTGTTCTCCGCACAATTTTCTGTCAGAACATGGAAGTCATGCTGAATTTTCAGATGTCAGATTTCGAGATACTGAACTGTATAAAAAAATAAATTTGCCTGACAGTGCCAGATCTTTTAGGCACAATTCTTTGGAATCTATGGAAATTGCAAAGGAAGTCACTCGGCAAATGAGAAACAGTTTGAACAATGGTTGCACCATGTCTTCCTCTTCTAGATTCAAAGGTTACTCTAGAAACGATAGTTCAAGCAGTGTTTCTGGTAACGAGTCTCCCGAGGAATCAGAGGAAATTACTGCAACTTTGGGTGACCCGTTTGACTTGAATAAACGAAACAGACGGTCACCGCGTTCTAGTGGATCATCTGTGAGTAAAGAGGCAAAGAAGAGACTATCAGAAAGGTGGAAGATGACTCACAAGTCTCAAGAGGTGCAAGTCGTCAGTAGAAGCAGCACACTGGCTGATATGCTAGCGTTCCCTGGTAAGAGAATGAAGGGTACAAGTTCTGACAGCATGACTACTGGGGATAAGTTTGCTCGCAATGGTGAACCTTCTGGGTGGGTTGAACCACTGGGTATCAGCAGTAAAGATGGTTGGAAGGATGGATATATTGGAAGTTTGTCGAGATCAAAATCTCTTCCTACTTCATCTACCGCCTTTGGAAATCCTAGATCATTCTCGTGCGCCGAAGCACTTCGCAATGATCGATATATGGTGCCAAAGGAATCCCTTAAAAGGGAGAAGAGAAGAGCCACAAAGAGTCTTGATCATAGGCATGGAACGTATACCGGAAGCACAAAATCTGGTCACAAGAAGTCTTGGTCTTTGCTTTCATTGAAGCAGGAAAATAATGAGTTTTCTCTGGATGTAAATGCTGTTCAAAATAGCATAGAGATGAATCTTTGGGAAGATTCTCAAAATGTAGAGGTTCTGGCCCCCGAATGCTTTGATGAGGCCCTCAGAGATACAAGTTCTGTTAGTGATGATGTTGCTGATGTCGCAAATAAAAACACAGTTGGGCCTTCTGAAACTTCTTTGGATAAGGTGCTTCCCGGATCATCGTCGATAAAAGGTGACAGTAGTGTTGTTGACAAAGACAATTCAATGCAAGAGGACCTATCAGCTGGTGGTGGAATTTCCGTCCCATCTGAAGCACCTGTACCTGAATCTCCATGCAGTAAAGATGCTGATCAGCCCAGTCCAATCTCAGTTCTAGATCCTTCTTTTACTGATGATCTGTCTTCTTGTTCGGAATGTTTTGGAAGTGTCAGTGCTGACCTACAAGGGCTTCGAATGCAACTCCAGTTGCTGAAGTTGGAATCTGAAGAACAAGTGGAGGGACCTATGCTAGTTTCAAGTGATGAAGATAGTGGGGAAACATCTGCTGGAATGTTAGCAGGCAATGGATTATGCAGAACTGAAGATAGCTGGGAGTCTTCTTACATTATTGATGTGTTGTCTGAATCTGCTATTGTTGAAACTCAACCTGACACTATTTTGGAAGTTTGGCATTCTCTAGAACGTCCTGTGAGTCTTTCTGTGTTTGAAGAACTTGAAGAGAGGTACGGTGATTGGACTACTTGTTCAAGGTCTGAAAGGAGGTTGCTTTTTGACCGTATAAATTCAGGAATTGTCAAGCTTCACGAGCAATCTGCTGATGCACAACCATGGGTCGGCAACACAACCATAAATTTTGGATCAAAAAGGGTTAATAATGGGCTTCAAGATGGTCTTTTCCGGATGCTAGGGAACCGAGGAAAGGTAGAGGATGATGCGTTGGGTAAGGTGCTGATTGGGGAGTCTCAATGGTTAGACTTGAGAAATGGTATTGATGTAATTGGAAGAGAAGTTGAGAGATTGATTTTAGATGATTTAGTGACAGAAATAGTCGGTATCTAA 2880 0.4243 MDKIKSHRTNSKLHLPQGNEQIHRQRQFPDLSPDSSSSSGGVAEKDSFSFKFGWKSSKQSVGTPIKKLLAEEMSPTAESKRRSPGVIARLMGLDGLPSQQPTNKQHKDPQKAMLSEKTRSRGMANDGRSSRRSSRDQQEFKDVFEVSEIPKAESGRYSSADLKVNEAEMSFIEQKFMDAKRLATYQDFQSSKDFHDTLEVLDSNKDLLLKYFKRPDSLFKKHLNDLQATPLQSHSGHIEPTNIENFEHDFTWRSDRETAQLNYKRFHQKHPNGHPCQFDKRRVMHNSPRSSKHHFKGSHEQGAVATKIVVLKPNMGKLQTGTRIESSPCSPHNFLSEHGSHAEFSDVRFRDTELYKKINLPDSARSFRHNSLESMEIAKEVTRQMRNSLNNGCTMSSSSRFKGYSRNDSSSSVSGNESPEESEEITATLGDPFDLNKRNRRSPRSSGSSVSKEAKKRLSERWKMTHKSQEVQVVSRSSTLADMLAFPGKRMKGTSSDSMTTGDKFARNGEPSGWVEPLGISSKDGWKDGYIGSLSRSKSLPTSSTAFGNPRSFSCAEALRNDRYMVPKESLKREKRRATKSLDHRHGTYTGSTKSGHKKSWSLLSLKQENNEFSLDVNAVQNSIEMNLWEDSQNVEVLAPECFDEALRDTSSVSDDVADVANKNTVGPSETSLDKVLPGSSSIKGDSSVVDKDNSMQEDLSAGGGISVPSEAPVPESPCSKDADQPSPISVLDPSFTDDLSSCSECFGSVSADLQGLRMQLQLLKLESEEQVEGPMLVSSDEDSGETSAGMLAGNGLCRTEDSWESSYIIDVLSESAIVETQPDTILEVWHSLERPVSLSVFEELEERYGDWTTCSRSERRLLFDRINSGIVKLHEQSADAQPWVGNTTINFGSKRVNNGLQDGLFRMLGNRGKVEDDALGKVLIGESQWLDLRNGIDVIGREVERLILDDLVTEIVGI 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00016 959 MobiDBLite consensus disorder prediction 659 734 - -
Car04g00016 959 MobiDBLite consensus disorder prediction 659 690 - -
Car04g00016 959 MobiDBLite consensus disorder prediction 488 518 - -
Car04g00016 959 MobiDBLite consensus disorder prediction 93 142 - -
Car04g00016 959 MobiDBLite consensus disorder prediction 570 597 - -
Car04g00016 959 MobiDBLite consensus disorder prediction 11 44 - -
Car04g00016 959 MobiDBLite consensus disorder prediction 389 423 - -
Car04g00016 959 MobiDBLite consensus disorder prediction 570 584 - -
Car04g00016 959 MobiDBLite consensus disorder prediction 450 467 - -
Car04g00016 959 PANTHER AFADIN 18 957 - -
Car04g00016 959 MobiDBLite consensus disorder prediction 109 142 - -
Car04g00016 959 Pfam Protein of unknown function (DUF3741) 173 217 IPR022212 -
Car04g00016 959 MobiDBLite consensus disorder prediction 1 44 - -
Car04g00016 959 Pfam Domain of unknown function (DUF4378) 806 955 IPR025486 -
Car04g00016 959 Pfam DUF761-associated sequence motif 78 100 IPR032795 -
Car04g00016 959 MobiDBLite consensus disorder prediction 389 470 - -
Car04g00016 959 PANTHER AFADIN 18 957 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00016 Car-Chr4 149339 154743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00016 61 957 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 37.001 2.65e-135 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00016 - - ccaj:109788117 1184.09