Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00012 ATGAGAATATTTTGCATGAATTCGAAAACGCCGTCGTTTTCCACAAACGAAAATAGTTCTCCATCCTCCAATTCAACTAATTCATCCACAACACCTTCGAATATCAAAGCAATTAAACGAATAGACGCAGCAGAAGCGATTATACAAAAATGGAACCCTGAAACCTCCCTTTATGCCAAAATCACTTCTCTTTTCTACAATAACAAAAACGAAGCCATTGAATACGTTCACTGCGTTAACCAACTTCAAAGAGCAATGCATTCGTTACTCGAATACGATCCATCTTCTCAGAAACTCATTCACGCACAAAACCTAATGCAAATCGCCATGAAAAGACTCCAAAAAGAGTTCTACCAGATCTTATCCATGAACCGGGCCCACCTCGATCCCGAATCCATCTCCGTTGGATCCTCTCGCACCACCTTTTGTTCCGATGATGGAACACCGGTGGACGATGTTCGCGAAGCAGAAGATTCAATCTCCGAAGTCGAACGCGTTTCTTCAGATTCCGTGGCGGATTTGAAAACCATTGCTGACTGTATGGTTTCCAACGGTTATGCAAAAGAATGCGTAAAAGTTTACATCACGGTGAGAAAATCGATCGTTAACGAAGGAATTTATGGACTCGGTTTCGAGGAGCAAATTAGTTTCTCGAAGGTGAATAAAATGGACTGGGAAGTTCTAGAGATGAAAATTAAGAGTTGGTTGGAGGCGGTTAATATTTCAGTTAGGACTCTATTCGTCGGAGAGAGGAACCTCTGCCATCGTATTTTCGCTTCGAGTTCCATAAGAGAAATTTGTTTCAGTGAGATTTCAAGAGTTGGAGCTACTCTTCTGTTTCGATTTCCGGAACTCGTCACCAGAACGAAGAAATCACCGCCGGAGAAGATCTTTAGCGTGCTTGATATGTATGTTGCAATCACCGTGCTGTTGCCGGAGATTGAATCGATTTTCTCGTTCAATTCAACCAATGCTATTAAATCTCAAGCATACGATTCGCGTTACCGACTTATCCAGTGTGTAAGAAATATTCTCTCAGAATTTGAGTCCGCAATCGTGAAGGATACTTCGAAATCGCCGGCGAACTTCGAAGGTGTTCATTCTCTGACAACGCGAACAATGCAGTACCTTACCAGTCTCGCAGATTACAGCAATGTGCTGAATGAAATATTCTTGGACATTAATCATCCGCCGTCAAAGTCCCCGTTGTCGGAAGACATCTACGCGACGGAAACGGCGACGGAATTTTCTGTATGGATGGCGAGGTTGATTGTGGTTCTAGTTTGCAAAATCGAGGGGAAATCGAAGCAGTGGAAGAATGCTTCATTGTGTTATCTGTTTGTTGCGAACAATCTCCAGCACTTGATGGAGAAGGTCCGTGCATCGAAGTTGCAATACGTTTTGGGCGATGATTGGGAGTTGAAGCATATAGCGAAGGTGAAGCAGTTGATGGAGGACTATGAGTCTTCCGTATCAAAGCACACAGGCAGCGATGAAGAAGTTGGTTTAGATCATCGGTAG 1521 0.4326 MRIFCMNSKTPSFSTNENSSPSSNSTNSSTTPSNIKAIKRIDAAEAIIQKWNPETSLYAKITSLFYNNKNEAIEYVHCVNQLQRAMHSLLEYDPSSQKLIHAQNLMQIAMKRLQKEFYQILSMNRAHLDPESISVGSSRTTFCSDDGTPVDDVREAEDSISEVERVSSDSVADLKTIADCMVSNGYAKECVKVYITVRKSIVNEGIYGLGFEEQISFSKVNKMDWEVLEMKIKSWLEAVNISVRTLFVGERNLCHRIFASSSIREICFSEISRVGATLLFRFPELVTRTKKSPPEKIFSVLDMYVAITVLLPEIESIFSFNSTNAIKSQAYDSRYRLIQCVRNILSEFESAIVKDTSKSPANFEGVHSLTTRTMQYLTSLADYSNVLNEIFLDINHPPSKSPLSEDIYATETATEFSVWMARLIVVLVCKIEGKSKQWKNASLCYLFVANNLQHLMEKVRASKLQYVLGDDWELKHIAKVKQLMEDYESSVSKHTGSDEEVGLDHR 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00012 506 Gene3D Exocyst complex component Exo70 46 504 - -
Car04g00012 506 Pfam Exo70 exocyst complex subunit 233 490 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car04g00012 506 MobiDBLite consensus disorder prediction 7 32 - -
Car04g00012 506 MobiDBLite consensus disorder prediction 1 32 - -
Car04g00012 506 SUPERFAMILY Cullin repeat-like 38 488 IPR016159 -
Car04g00012 506 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 488 IPR004140 GO:0000145|GO:0006887
Car04g00012 506 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00012 Car-Chr4 124148 126027 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00012 41 488 EXO70 exocyst subunit family AT3G09520 49.015 5.37e-142 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00012 K07195 - gmx:100798477 570.466