Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03197 ATGGTGGATTTTGGAAGGGTAATAATGGTTTTGTTCACTTCAACTTACTTCATTCTTCTTGTTTGGATCTCTTCCACTGCCGCCACTACAGATCCAACTCACGTTGCGGCTTTAAAGGCTATGTTTCAAAGCATGAATTCACCATCCCAACTAGGTTGGCCTACTAATGCTGATGATCCTTGTGGACAATCTTGGAAAGGCATTACTTGTTCAGCCAACAGTGTTACGCAGATTGTGCTATCTAATCTTGCTCTAACTGGAACGTTATTGCCTTACGGATTTCAAGACTTGACATCTCTCACCAACCTAGACATCAGTAACAACAATCTCTTTGGACCCATACCATACCAACTTCCTCCAAATGTTCAGCGCTTAAATTTTGCTCATAACAACTTGACTGGGGCAGTCCCTTACTCTATTTCTAACCTGACCTCTCTTACAGACTTGAATCTCAGTCACAATCAGCTCCAGCAAGCACTGAATGTCAACTTTCAATATCTTTCTACCCTCTCCAAATTAGACCTCTCTTTCAATTCTTTGGCAGGTGACCTCCCTCAGACTATGAGCTCCCTTTCAGGCATAACCACCATGTATCTGCAAAACAACCAGTTTACAGGCACTATTGATATTCTTGCTAATCTGCCTCTGCATAGTCTGAATGTAGAAAACAATAATTTTACAGGATGGATACCGGAACGGTTGAAAAACATAGACATTCAGTCGGGTGGTAATGCGTGGAGCTCAGTACCTGCACCCCCACCTCCTCCTGGAACACCTCCAGTACCTAAAAGCAACCAACACCACAAATCTGGTGGTGTAAGTACCACTGGCCAAGATGCCAGCAGTGGCACAATTGATGAGGGAAAAAAATCTGGAATAGGAGGTGGTGGCATAGCTGGAATTGTCATCTCCATTATTGTTGTTGGGGCAGTAGTAGCATTCTTTCTGATGAAGAGAAAATCCAAGAAGTCATCTTCAGATGTAGAAAAGCTGGGCAGTCAGTCTACCGCTCCTCTTCCTTCAAATGAAGTCCATGAAGTTACGTCTGTGCAGACTTCTTCTGTATTTGACTTGAAGAGGTTTGATACTTCTGCCTCAATAAATCTCAAACCCCCACCTATTGATCGTCATAAATCATTTGATGACAACGAACACTCAAAGAAGTCTACTATTGTCAAGAAGACTGTAACAGCTCCTGCAGATGTGCAATCATATTCTATAGCTGATCTTCAGATTACTACTGGGAGCTTCAGTGTGGACCATCTTGTTAGTGAGGGGTCTTTCGGGCGTGTGTACCGTGCTCAATTTGATGATGGGAAGGTTCTTGCAGTGAAGAAAATAGATTCATCTGTCCTTCCCAATGATTTTTCAGAAGATTTTATTGAAATAGTGGCAAACATCTCCCATTTACATCATCCAAATGTAACAGAGCTTGTAGGTTATTGTTCAGAGCATGGACAGCACCTCTTAGTTTATGAGTTTCATAAAAATGGATCACTGCATGACTTCCTTCATGTGTCAGATGAATACAGTAAACCATTAATATGGAATTCCCGTGTCAAGATAGCGTTGGGGACAGCACGCGCTTTAGAGTACCTGCACGAAGTTTGTTCTCCATCAATTGTGCATAAGAATATTAAGTCTGGCAATATATTGCTTGATGCAGAGCTTAATCCTCATCTGTCAGACTGTGGATTGGCAAGCTATGTTCCAAATGCAGAGCAGATACTGAACCATAATGTTGGGTCTGGATATGATGCACCTGAAGTTGCGTTGTCTGGTCAGTATACCTTTAAAAGTGATGTCTACAGCTTTGGGGTTGTCATGTTGGAACTTCTTAGTGGACGGAAACCATTTGATAGCTCAAGGCTAAGAGCAGAACAGTCTTTGGTTCGATGGGCAACACCCCAGCTTCATGACATTGATGCATTGGCTAAAATGGTTGATCCTGCACTGAAAGGGCTATATCCTGTCAAATCTCTATCACGTTTTGCTGATGTTATTGCTCTTTGTGTTCAGTCGGAACCTGAGTTCCGACCACCTATGTCAGAGGTGGTTCAAGCGATGGTACGATTAGTGCAGCGAGCTAACATGAGCAGGCGGACATTTGGAAGTGATCATGGAGGATCCCTCCGAGGAAGTGATGAGCCAGCTATACAAGACatctaa 2169 0.4283 MVDFGRVIMVLFTSTYFILLVWISSTAATTDPTHVAALKAMFQSMNSPSQLGWPTNADDPCGQSWKGITCSANSVTQIVLSNLALTGTLLPYGFQDLTSLTNLDISNNNLFGPIPYQLPPNVQRLNFAHNNLTGAVPYSISNLTSLTDLNLSHNQLQQALNVNFQYLSTLSKLDLSFNSLAGDLPQTMSSLSGITTMYLQNNQFTGTIDILANLPLHSLNVENNNFTGWIPERLKNIDIQSGGNAWSSVPAPPPPPGTPPVPKSNQHHKSGGVSTTGQDASSGTIDEGKKSGIGGGGIAGIVISIIVVGAVVAFFLMKRKSKKSSSDVEKLGSQSTAPLPSNEVHEVTSVQTSSVFDLKRFDTSASINLKPPPIDRHKSFDDNEHSKKSTIVKKTVTAPADVQSYSIADLQITTGSFSVDHLVSEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNDFSEDFIEIVANISHLHHPNVTELVGYCSEHGQHLLVYEFHKNGSLHDFLHVSDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSIVHKNIKSGNILLDAELNPHLSDCGLASYVPNAEQILNHNVGSGYDAPEVALSGQYTFKSDVYSFGVVMLELLSGRKPFDSSRLRAEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQSEPEFRPPMSEVVQAMVRLVQRANMSRRTFGSDHGGSLRGSDEPAIQDI 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03197 722 MobiDBLite consensus disorder prediction 328 346 - -
Car03g03197 722 Pfam Leucine rich repeat N-terminal domain 36 71 IPR013210 -
Car03g03197 722 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 25 716 - -
Car03g03197 722 SUPERFAMILY L domain-like 30 235 - -
Car03g03197 722 Gene3D Phosphorylase Kinase; domain 1 377 494 - -
Car03g03197 722 SUPERFAMILY Protein kinase-like (PK-like) 401 688 IPR011009 -
Car03g03197 722 ProSiteProfiles Leucine-rich repeat profile. 145 166 IPR001611 GO:0005515
Car03g03197 722 MobiDBLite consensus disorder prediction 325 346 - -
Car03g03197 722 MobiDBLite consensus disorder prediction 263 285 - -
Car03g03197 722 Pfam Protein tyrosine and serine/threonine kinase 420 688 IPR001245 GO:0004672|GO:0006468
Car03g03197 722 Pfam Leucine rich repeat 120 156 IPR001611 GO:0005515
Car03g03197 722 ProSiteProfiles Protein kinase domain profile. 417 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g03197 722 PRINTS Leucine-rich repeat signature 100 113 - -
Car03g03197 722 PRINTS Leucine-rich repeat signature 143 156 - -
Car03g03197 722 MobiDBLite consensus disorder prediction 241 291 - -
Car03g03197 722 Gene3D Transferase(Phosphotransferase) domain 1 496 707 - -
Car03g03197 722 MobiDBLite consensus disorder prediction 701 722 - -
Car03g03197 722 MobiDBLite consensus disorder prediction 248 262 - -
Car03g03197 722 CDD STKc_IRAK 423 692 - -
Car03g03197 722 Gene3D Ribonuclease Inhibitor 31 249 IPR032675 -
Car03g03197 722 PANTHER OS01G0253100 PROTEIN 25 716 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03197 Car-Chr3 76593852 76601464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03197 30 706 Strubbelig Receptor Gene Family AT1G53730 65.300 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Car03g03197 PK_Tyr_Ser-Thr 1.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03197 - - gmx:100807707 1108.59