Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03193 ATGATGGAGTTGATGCAAGGATTGAAAGGGTATTCTGGGGATAGCAGGgaagaagaggaagaggaagaagaaATAATCGCAATCACAGGAGAAGAAAGCAGGTTACAGTTAGAGAAGTTGCAGCAGCAGCAGCAGCaggaagaagatgtgggaaatgagcagcagcaagaggaagaggaggaggaggtagatatgatggagttgagactgggagggagcaagagcaagtgcagggaggaggaggaggaagaagaagaagaaATAATAGTGGAGAAAGAGCACATGTTTGACAAAGTGGTGACGCCGAGTGACGTAGGGAAACTGAACAGACTTGTGATACCAAAGCAGCACGCAGAAAAGTACTTTCCACTGGATTCTTCATCGAACGAGAAAGGTCTACTTCTGAATTTCGAAGATCGGAATGGGAAGATGTGGAGGTTTAGGTATTCTTATTGGAATAGTAGCCAAAGTTATGTGATGACAAAAGGATGGAGCCGTTTTGTTAAGGAGAAGAAATTGGAAGCAGTTCCTTTCTATCTTCCACCGCATCACTACTCATCATCTTCAAGATCATTATACTCTTCCCACCCTCCTCCTAATTACGCCACGCTTCCTCCTAATTATCAACATCTCAACAACACTAATAATTTCTATACCCTTCAACCCCAACCACACCGCAACCACTACCCTGCACCTGCTCCTCCCGATCAATTCTACTATCTGACGTCACCATCAACAACGGGGCAACAACAAGGGaataataataataatatgataatTGATTCTGTACCGGTTGCTCATCACCACCGCGGTGGCGGCAATACAGGAGGAAAACGGTTGAGGCTATTTGGGGTGAACATGGAATGTGGCGcatcatcgtcatcatcttcagcagcagcaCACGTGTCAACAACAACAATGTCTGGGTCTGGAGATGAGAGAGGGGAAACTTCAGTGCTGTTTGATTTGGATCCCTCAAATTCGCAATCAGCAGGACCAGAAGCAGTCACCTTCTTGTCTTGA 1023 0.3685 MMELMQGLKGYSGDSREEEEEEEEIIAITGEESRLQLEKLQQQQQQEEDVGNEQQQEEEEEEVDMMELRLGGSKSKCREEEEEEEEEIIVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLEAVPFYLPPHHYSSSSRSLYSSHPPPNYATLPPNYQHLNNTNNFYTLQPQPHRNHYPAPAPPDQFYYLTSPSTTGQQQGNNNNNMIIDSVPVAHHHRGGGNTGGKRLRLFGVNMECGASSSSSSAAAHVSTTTMSGSGDERGETSVLFDLDPSNSQSAGPEAVTFLS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03193 340 MobiDBLite consensus disorder prediction 291 313 - -
Car03g03193 340 Gene3D - 89 180 IPR015300 -
Car03g03193 340 MobiDBLite consensus disorder prediction 291 340 - -
Car03g03193 340 SMART B3_2 96 196 IPR003340 GO:0003677
Car03g03193 340 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 30 304 - -
Car03g03193 340 SUPERFAMILY DNA-binding pseudobarrel domain 93 175 IPR015300 -
Car03g03193 340 MobiDBLite consensus disorder prediction 239 258 - -
Car03g03193 340 MobiDBLite consensus disorder prediction 224 258 - -
Car03g03193 340 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 30 304 IPR044800 GO:0003700
Car03g03193 340 MobiDBLite consensus disorder prediction 51 65 - -
Car03g03193 340 Pfam B3 DNA binding domain 96 175 IPR003340 GO:0003677
Car03g03193 340 Coils Coil 30 60 - -
Car03g03193 340 MobiDBLite consensus disorder prediction 35 50 - -
Car03g03193 340 MobiDBLite consensus disorder prediction 321 340 - -
Car03g03193 340 MobiDBLite consensus disorder prediction 1 81 - -
Car03g03193 340 ProSiteProfiles B3 DNA-binding domain profile. 96 199 IPR003340 GO:0003677
Car03g03193 340 CDD B3_DNA 94 180 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03193 Car-Chr3 76550141 76553053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03193 75 292 RAV Transcription Factor Family AT2G46870 48.988 1.82e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Car03g03193 B3 1.6e-23 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03193 - - cam:101502852 280.411