Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03188 atgaatgatgaaggcagcagATCCGTAGTGATGGGAGGCATTGATGATGAATCGAAGAATTTGGAATTAGAAGATGAAGAAGATAGCTTCTCACATGCTGTACAGCTGAGCAACTCTATTGTTCTTTCAATGGCACTTCAATCAGCAACTGAACTCGGTGTATTTGATGTCTTGCGTAAAGCCGGTACTACTGCTCAACTCTCCGCCCAAGATATTGCTTCCCTTATTTCATGCAACAATAATAATCCTGAACAATCCCCTCAAATGTTAGATCGAATTCTTTTTCTTCTTTCTTCCCACTCTCTCCTCAAATGTTCTCTCCTTCAAGATCAACATATTCTTGGATCCTATCACCGACTATACACCATCACTCCTGTTGCCAAATTCTTTGCTTCTAATTCCGATGGCGTTTCATTAGCTCCCTTGTTGGCATTGCATCATCATCAAATCTTCTTAGATAGCTGGTCTCAGCTTAAAGATTCTATTCGGGAAGGGGGTATTCCTTTCAACAGGGTTCATGGCACACACGCCTTTGATTATCCCAGCCTCGACTCCAGGTTCAATCATGTTTTCAATACTGCCATGATCAATTACACCACTATTGTTATGAACAAGCTCCTTCAATGTTACAAAGGTTTTGATGAGGTTAAAAGCCTTCTTGATGTTGGTGGCGGTCTTGGGATCACCATTAACATGATCACCTCTAAATACCCTCATATACAGGGTATCAATTTCGACTTACCTCGTGTTATAGAACATGCTCCTTCCTATCCTGGAGTGGAACACGTTGGTGGAGATATGTTTGAAACTGTGCCTAAAGCAGATGCCATCTTTATGAAGTGGATACTTCATGATTGGAGTGATGAGAAGTGCTTAAAGCTTTTGAAGAATTGCTATAATGCTATTCCTGATGATGGAAAGGTGATTATTTTGGAGACAGTTCTTTCTATTATACCTGAGAATAATGCTGCTTGGAAGTTTGCATCACAATCAGATGTTCTGATGATGACTCAAAATCCAGGAGGGAAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAGAGCGAACTGAGCAAGAATTTATGGATTTGGCAACTGGAGCTGGATTTTGCGGTATTAGATATGAATGCTATGTTCGTACTTTTTGGGTTATGGAGTTCTTCAAGTAGATAA 1323 0.3424 MNDEGSRSVVMGGIDDESKNLELEDEEDSFSHAVQLSNSIVLSMALQSATELGVFDVLRKAGTTAQLSAQDIASLISCNNNNPEQSPQMLDRILFLLSSHSLLKCSLLQDQHILGSYHRLYTITPVAKFFASNSDGVSLAPLLALHHHQIFLDSWSQLKDSIREGGIPFNRVHGTHAFDYPSLDSRFNHVFNTAMINYTTIVMNKLLQCYKGFDEVKSLLDVGGGLGITINMITSKYPHIQGINFDLPRVIEHAPSYPGVEHVGGDMFETVPKADAIFMKWILHDWSDEKCLKLLKNCYNAIPDDGKVIILETVLSIIPENNAAWKFASQSDVLMMTQNPGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSELSKNLWIWQLELDFAVLDMNAMFVLFGLWSSSSR 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03188 440 Gene3D - 12 130 IPR036388 -
Car03g03188 440 Coils Coil 404 410 - -
Car03g03188 440 MobiDBLite consensus disorder prediction 1 25 - -
Car03g03188 440 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 344 IPR029063 -
Car03g03188 440 Pfam O-methyltransferase domain 155 343 IPR001077 GO:0008171
Car03g03188 440 PANTHER O-METHYLTRANSFERASE 17 344 IPR016461 GO:0008168
Car03g03188 440 SUPERFAMILY "Winged helix" DNA-binding domain 25 133 IPR036390 -
Car03g03188 440 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 17 344 - -
Car03g03188 440 Pfam Dimerisation domain 44 97 IPR012967 GO:0046983
Car03g03188 440 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 34 409 IPR016461 GO:0008168
Car03g03188 440 Gene3D Vaccinia Virus protein VP39 131 348 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03188 Car-Chr3 76502426 76506615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03188 21 343 Monolignol Biosynthesis Gene Families AT5G54160 50.309 1.43e-113 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03188 K13066 - gmx:100803633 484.182