Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03187 ATGGCTCCTTCAACAGAATCTGATAAACAACATACCAACGGAAAAGACAAGCACCTTAaagaaggagaaaaagaagaagaTGCGTTCGAATTTAGCATGCAAATAGCAGGTTCAATTGTTGTACCATTAGCTTTGCGTTCAGCAATTGATCTTGGCATATTTGATATTCTAAGCAAAGCTGGTGAAGGTGCCGAGCTATCTACACAAGACATTTCCCTTCAAATTGGAACCAACAACCCACAAGCACCAACAATGTTGGATCGTCTTCTTAGGTTGTTGGCAAGTCACTCTATTCTAAACTGCTCTGTTCCTCAACATCCACAAAACCCTCAAAGACTCTACAGCCTCTCCCATCGATCCAAATATTTTGTCTCCGATGCTGATGGCGTCTCTCTGGGACCCACCATGGCATTACTTCTCGACAATGTCTTCTACCAAAGCTGGTCGGAACTGAAAGGAGCGATAATGGAAGGTGGCATACCGTTCAATAGAGTATATGGAATGAATGCTTTTGAGTACCCACGTGTGGATCCAAGGTTCAATGAGGTTTTCAACAAAGCTATGGTTAACTCAACAACTATAAATATGAAAGGGATTCTTAATTGCTACAAAGGTTTCGACCACGTCACTAAGCTGGTTGACGTTGGTGGTGGTCTTGGAATTAACCTCAAATTGATCACATCAAAATATTCTCATATTCAAGGAATTAACTTTGACTTGCCTCATGTTGTAGAACACGCACCTCTCTACCCAGGTGTGGACCACGTGGGAGGAGATATGTTTGAGAGTGTTCCTTCAGGGGATGCCATTTTTATGAAGTGGATACTTCATGATTGGAGTGATGAACATTGCTTGAAAGTGTTGAAAAATTGCTACAAAGCTATTCCTGAGGATGGAAAGGTTATTGTGGTGGATTCAATCCTTCCTATTACGGCTGAAACAACAACGAGTGCAAAATCTGCTTTCATGTCTGATCTTTTAATGATGACTCAAAATCCAGGAGGAAAAGAAAGAACTGAGCAAGAATTCATGGAATTGGCAAAAGGGTCTGGATTTAGTGGCATCAAATTTGTATGTTGTGTCTCTGGACTATGGGTTATGGAGTTTTATAAATAG 1116 0.4023 MAPSTESDKQHTNGKDKHLKEGEKEEDAFEFSMQIAGSIVVPLALRSAIDLGIFDILSKAGEGAELSTQDISLQIGTNNPQAPTMLDRLLRLLASHSILNCSVPQHPQNPQRLYSLSHRSKYFVSDADGVSLGPTMALLLDNVFYQSWSELKGAIMEGGIPFNRVYGMNAFEYPRVDPRFNEVFNKAMVNSTTINMKGILNCYKGFDHVTKLVDVGGGLGINLKLITSKYSHIQGINFDLPHVVEHAPLYPGVDHVGGDMFESVPSGDAIFMKWILHDWSDEHCLKVLKNCYKAIPEDGKVIVVDSILPITAETTTSAKSAFMSDLLMMTQNPGGKERTEQEFMELAKGSGFSGIKFVCCVSGLWVMEFYK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03187 371 PANTHER O-METHYLTRANSFERASE 1 371 IPR016461 GO:0008168
Car03g03187 371 MobiDBLite consensus disorder prediction 1 25 - -
Car03g03187 371 SUPERFAMILY "Winged helix" DNA-binding domain 23 126 IPR036390 -
Car03g03187 371 Gene3D - 11 123 IPR036388 -
Car03g03187 371 Pfam Dimerisation domain 44 94 IPR012967 GO:0046983
Car03g03187 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 370 IPR029063 -
Car03g03187 371 Pfam O-methyltransferase domain 148 353 IPR001077 GO:0008171
Car03g03187 371 PIRSF O-mtase 10 371 IPR016461 GO:0008168
Car03g03187 371 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 371 - -
Car03g03187 371 Gene3D Vaccinia Virus protein VP39 124 371 IPR029063 -
Car03g03187 371 MobiDBLite consensus disorder prediction 9 25 - -
Car03g03187 371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 33 371 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03187 Car-Chr3 76495450 76498582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03187 25 371 Monolignol Biosynthesis Gene Families AT5G54160 53.736 1.13e-137 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03187 K13066 - gmx:100789402 531.176