Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03183 ATGGGTGAGGTAGCAGAGACTGAGATGCTGAACAACCATGTCTCTCTCCAGGAGGACTTGGTTAGCTCGGAGACCTTCCTTCCTCCGGTCATGCTTAGGGTGTTGCTCGTTGAAGCTGATGACTCTACTCGCCAGATTATTTCTGCTCTTCTCCGCAAATGCGGTTACAAAGTTGCTGCAGTTCGTGACGGCTTAAAGGCATGGGAGACATTGAAGAACAAATCAGTGAATATAGATCTTGTATTAACGGAAGTGGATTTGCCATCAATATCCGGTTTTTCACTACTTACTTCAATCATGGAGCATGCCAGTTGCAAAAACATTCCTGTCATAATGATGTCTTCTCACGATTCAGTTAGTACTGCGTTCAAGTGCATGCTAAACGGGGCTGTTGATTTTCTCATTAAACCTGTTCGGAGGAATGAGCTTAGGAACTTGTGGCAGCATGTGTGGAGAAGGCATACTATTAGCAGGCCTTCTCAAAATATAACATCTCCACAGACTAAACTTGACGTTGCTCCAGAAAGCAATGCTCCAAGCAATAATTCTAGTGGTTCTGTGGCTTCCACGCAAAAAAATAATGAATGCAGCGAAAAAACTAGTGAGACTCAAGATATGTCCCAGCTAAAGAGTTCTTTAAGTTTGAGCAATACCGACAAGGTGAAGCAGGAAAGTTCTATCAAATTTGAAAGGGAGTCTGCTGAGTATAACAATGAAACTGGAGAGAAATCAACTACATTAGTATCTAAAGTGGCAAGGTACGACAAAATTTCAACAGGTTTAAGGCTAGGTCAATGCTATGATCATAGTGAAACAGAAAACCAAGATCAAGATGAAGTGTTAAGAACAGAGTTAAGCAAAGCCGATCCTCATATCAATAGAAAGATTCATCGATGCAATGATGAACTAGTAGAACATTGCACTGGAGCTATTGACTTGATTGCTACTATTGAGAATCTTCCAAAGAGCAGTTATGCAAATTGTAGTTTCAATGGTGGTAACACAGCCAAGTTTGATTTTGATTCACAATTGGAACTTTCTTTACAAAGAGATTTTCGTGGCAGCTCACCCCAACCTACTACTGAGGAAAGACATATATTGAATCATTCAAATGCTTCTGCGTTTTCTTGGTATGGCAGCAGTAAGTTGTTGCACCCTCTATTTCCATCAAATAATTTTCATGAATCACATAAATTATCCCAAGATACAAATACTACTCAGTCTGGACAAGTCGATGCAAAATTGCCAAACAGTCTACTTGAATTCTTTCCAGCCACCGGGTCCACGTTTGATAATAAGTCTATAGGACATGGTAATGTTTTTCATTCAATGTTCTACATAGAATCACCAAAGTCAGTTTGTCAGAAAGAGAGTTCTTCATTTCCCACAAGTATTTCCTCCCAGTCCAATCCTAAAAATCAGAACTCAGAACGATCGGATGATGCCACCTATAGTACTTGTGATCAAAACGTAAATGATCAAAGCACTGTTGATTGTGCTATGCATAATTCTCCAGCTAGTGGTCAAAGTAGTGGTACTAGTTTTTACCATGATGCGGTAAATCATAACGCTAGTGGTGTATGTGAAGGCACAGGTAGCGGAAGTGATGGAAATGCCCCTTCTGTTGTAGGCAATAACAACTTTGAAAGTTCTATGAATAATGATCATTATGACGGGCTTAGAGGCACAAATTCTCATCGTACCAGCCAAAGAGAAGCAGCTCTAACAAAGTTTCGGCTAAAGCGAAAAGACAGATGTTATGAAAAAAAGGTGCGATATGAAAGCAGGAAAAGGCTGGCAGACAACCGTCCCCGGGTGAAAGGACAGTTTGTTCGCCAAGTACACAGTGAACATCCGGCAGCTGATGCCGGAGGTTACTGA 1881 0.4088 MGEVAETEMLNNHVSLQEDLVSSETFLPPVMLRVLLVEADDSTRQIISALLRKCGYKVAAVRDGLKAWETLKNKSVNIDLVLTEVDLPSISGFSLLTSIMEHASCKNIPVIMMSSHDSVSTAFKCMLNGAVDFLIKPVRRNELRNLWQHVWRRHTISRPSQNITSPQTKLDVAPESNAPSNNSSGSVASTQKNNECSEKTSETQDMSQLKSSLSLSNTDKVKQESSIKFERESAEYNNETGEKSTTLVSKVARYDKISTGLRLGQCYDHSETENQDQDEVLRTELSKADPHINRKIHRCNDELVEHCTGAIDLIATIENLPKSSYANCSFNGGNTAKFDFDSQLELSLQRDFRGSSPQPTTEERHILNHSNASAFSWYGSSKLLHPLFPSNNFHESHKLSQDTNTTQSGQVDAKLPNSLLEFFPATGSTFDNKSIGHGNVFHSMFYIESPKSVCQKESSSFPTSISSQSNPKNQNSERSDDATYSTCDQNVNDQSTVDCAMHNSPASGQSSGTSFYHDAVNHNASGVCEGTGSGSDGNAPSVVGNNNFESSMNNDHYDGLRGTNSHRTSQREAALTKFRLKRKDRCYEKKVRYESRKRLADNRPRVKGQFVRQVHSEHPAADAGGY 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03183 626 MobiDBLite consensus disorder prediction 223 238 - -
Car03g03183 626 MobiDBLite consensus disorder prediction 527 573 - -
Car03g03183 626 ProSiteProfiles Response regulatory domain profile. 33 151 IPR001789 GO:0000160
Car03g03183 626 MobiDBLite consensus disorder prediction 158 222 - -
Car03g03183 626 SMART REC_2 32 147 IPR001789 GO:0000160
Car03g03183 626 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 200 IPR045279 GO:0009736
Car03g03183 626 PANTHER TWO-COMPONENT RESPONSE REGULATOR 203 623 IPR045279 GO:0009736
Car03g03183 626 MobiDBLite consensus disorder prediction 527 571 - -
Car03g03183 626 Gene3D - 32 288 - -
Car03g03183 626 PANTHER PRR RESPONSE REGULATOR 18 200 - -
Car03g03183 626 PANTHER PRR RESPONSE REGULATOR 203 623 - -
Car03g03183 626 MobiDBLite consensus disorder prediction 457 488 - -
Car03g03183 626 Pfam Response regulator receiver domain 34 145 IPR001789 GO:0000160
Car03g03183 626 CDD psREC_PRR 34 137 - -
Car03g03183 626 Pfam CCT motif 571 613 IPR010402 GO:0005515
Car03g03183 626 MobiDBLite consensus disorder prediction 158 241 - -
Car03g03183 626 SUPERFAMILY CheY-like 31 163 IPR011006 -
Car03g03183 626 ProSiteProfiles CCT domain profile. 571 613 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03183 Car-Chr3 76476733 76481495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03183 20 155 Response Regulator Gene Family AT5G24470 75.735 6.25e-69 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Car03g03183 Response_reg 1.8e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03183 K12130 - gmx:100809490 739.184