Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03162 ATGAAGAGTGGTGAGAAGTGTGTGAAGAAGCAAGGTGTACCAAAAGGGTGTCTTGCAATCAAAGTGGGTCAAGGAGAAGAACAACAAAGATTCGTTGTGCCAGTTATGTATTTCAACCACCCACTTTTCATGCATCTTCTCAAAGAAGCAGAGGAAGAATTTGGATTTGATCAGAAAGGAACAATAACAATTCCTTGTCATGTTGAAGAGTTCAGAAACATAAGAGGTTTGATTGATAGGGAAAAGTCTTTTCATCATCATACTCGTTGTTTTGGCTTCTGA 282 0.3865 MKSGEKCVKKQGVPKGCLAIKVGQGEEQQRFVVPVMYFNHPLFMHLLKEAEEEFGFDQKGTITIPCHVEEFRNIRGLIDREKSFHHHTRCFGF 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03162 93 PANTHER SMALL AUXIN-UP RNA-RELATED 9 88 - -
Car03g03162 93 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 9 88 IPR003676 GO:0009733
Car03g03162 93 Pfam Auxin responsive protein 9 74 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03162 Car-Chr3 76373841 76374562 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03162 13 72 Calmodulin-binding Proteins AT5G20810 58.333 1.43e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03162 K14488 - vra:106754022 159.073