Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03149 ATGAGAGGAATGGCAACTGAAGACAAACTAAACATTACAAGCATGGAAGGGATAAATGATCTGAATTCGTGCAGAATGTCAGAGAAGAAAACAAGAGTAGAAGAGCAATTGAATTGTCCAAGGTGCAAATCAAGCAACACCAAATTCTGTTATTACAACAACTATAGCCTCACACAACCAAGATACTTGTGCAAAACTTGCAAAAGGTATTGGACACAAGGTGGTTCACTCAGAAACATTCCTGTTGGAGGTAGTTCTAGAAAGAACAACAAGCTCATATCATCATCATCACAAAATAATATTATTAAAGGCCATGATCTTAATTTGGCTTTTCCATCTATGGACAAGTATCCTGCAAGCATGTTTTCTTCTACTAGTGGTTTGATCAATAATTCAGCTACTAATTATGTTCCTAATAATTCCTTGATGATGATGTCAAGTTCAGATGCATCTGGTCAGGAAATTAAACCAACTAATCTTGGATTTTCACTTGAAAACAGATATTCTAATTCATATGAAGTCCAAGTTCAAGAGAATGTTGGGACACTTTTGTTTCCTTTTGGAGATATGAACCAAATTTCTACAACTCATCATGTTGAAGTGGAACATGACAAAGAACAAGGAAACTCAACCGGATATAATTGGAATGGAGTCATAGGTGAAGGCTCATCATGgtaa 678 0.3569 MRGMATEDKLNITSMEGINDLNSCRMSEKKTRVEEQLNCPRCKSSNTKFCYYNNYSLTQPRYLCKTCKRYWTQGGSLRNIPVGGSSRKNNKLISSSSQNNIIKGHDLNLAFPSMDKYPASMFSSTSGLINNSATNYVPNNSLMMMSSSDASGQEIKPTNLGFSLENRYSNSYEVQVQENVGTLLFPFGDMNQISTTHHVEVEHDKEQGNSTGYNWNGVIGEGSSW 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03149 225 Pfam Dof domain, zinc finger 35 91 IPR003851 GO:0003677|GO:0006355
Car03g03149 225 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 22 213 IPR045174 GO:0003700|GO:0006355
Car03g03149 225 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677|GO:0006355
Car03g03149 225 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
Car03g03149 225 PANTHER DOF ZINC FINGER PROTEIN DOF3.5-LIKE 22 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03149 Car-Chr3 76307004 76308124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03149 26 224 C2C2-Dof Transcription Factor Family AT4G00940 38.494 2.00e-41 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car03g03149 zf-Dof 9.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03149 - - cam:101515645 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03149 03 76307004 76308124 Car07g02892 07 54931245 54933654 PCT