Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03147 ATGGGAAGAGCTCCTTGTTGTTCAAAAGTTGGATTGCATAGAGGTCCATGGACTCCTCGTGAAGATGCATTGCTCACCAAGTATATTCAAGCTCATGGAGAAGGCCAGTGGAGATCACTTCCAAAAAGAGCCGGGCTTCTTAGATGTGGAAAAAGTTGCAGACTGAGATGGATGAACTATTTGAGACCAAATATAAAGAGAGGAAACATAACACCAGATGAAGAGGACCTTATTATAAGAATGCATTCACTTATTGGAAATAGATGGTCCCTTATAGCGGGAAGATTACCAGGACGAACAGATAACGAGATTAAGAATTATTGGAACACTCATCTCATTAAAAAACTCAAAAATCAAGGAGGAATAACTGATCCAAACACAAACAACAAGTTGACAGATCCTGCTCaagaatcaccaatgaacaagaaaaagatcaagaataagaacaagaataaaggcaagaaaaaagtattagagtcagagaagaaGACTTTATTATATATACCAAAGCCTATAAGGGTCAAGACTTTATCATCTATAAGTGCATCAACAACAAGCCAAGAGGAAGAGCAAAGAACAGAAAGAATAGAGGAAAACGGGGTAGGTAAAGAGGGAGAAAATGACAGGTTTGGATTATTCTTTGCTGAACATCACCATGAGGACTTGGTCACCAACAGTGATATGGAATGTCAATCTGGTTTTCTTGAGAAGCTGTATGAAGAGTACTTGAATCTCTTGAAGAATGAAGAGAATATTCATGACAATTATTAG 771 0.345 MGRAPCCSKVGLHRGPWTPREDALLTKYIQAHGEGQWRSLPKRAGLLRCGKSCRLRWMNYLRPNIKRGNITPDEEDLIIRMHSLIGNRWSLIAGRLPGRTDNEIKNYWNTHLIKKLKNQGGITDPNTNNKLTDPAQESPMNKKKIKNKNKNKGKKKVLESEKKTLLYIPKPIRVKTLSSISASTTSQEEEQRTERIEENGVGKEGENDRFGLFFAEHHHEDLVTNSDMECQSGFLEKLYEEYLNLLKNEENIHDNY 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03147 256 Gene3D - 14 66 - -
Car03g03147 256 MobiDBLite consensus disorder prediction 120 136 - -
Car03g03147 256 CDD SANT 16 61 IPR001005 -
Car03g03147 256 MobiDBLite consensus disorder prediction 179 202 - -
Car03g03147 256 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Car03g03147 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Car03g03147 256 MobiDBLite consensus disorder prediction 118 156 - -
Car03g03147 256 PANTHER MYB TRANSCRIPTION FACTOR 1 247 - -
Car03g03147 256 SMART sant 66 114 IPR001005 -
Car03g03147 256 SMART sant 13 63 IPR001005 -
Car03g03147 256 CDD SANT 71 112 IPR001005 -
Car03g03147 256 MobiDBLite consensus disorder prediction 188 202 - -
Car03g03147 256 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Car03g03147 256 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Car03g03147 256 Gene3D - 71 116 - -
Car03g03147 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Car03g03147 256 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Car03g03147 256 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Car03g03147 256 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03147 Car-Chr3 76299923 76301301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03147 4 131 MYB Transcription Factor Family AT3G13540 72.656 3.37e-66 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car03g03147 Myb_DNA-binding 1.4e-13 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03147 03 76299923 76301301 Car07g02889 07 54863775 54865091 PCT