Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03141 ATGGAAGCCGAAACTCGACGCAAAGTAGAAGACATGGTTTTAGATATACTGAAAAAATCCAACATTCAAGAAACCACTGAGTTTACTATCCGAGTTGCCGCCTCTGAGCGACTCGGTGTCGACCTCTCCGACCCACACAGTAAGCATTTTGTCAGAAACATCATCGAATCTTATCTTCTTTCAATCGCCACCGACGAGAAACCGCCACAAGAAACCACAGAGGTGCCGGTGGTAATTCCCAAAGAACCGCTCGAAGAAGAGTTCACTGAGGCGTTGAGAGTTATTAAACGCAGAAACGATGACTCCGAACGCTTTATTTGTCAGCTATCAACCAAGAGGAATGTGGTAGTCCGAGATTTCAAAGGAACGACATTGGTGTCAATTAGGGAGTTCTATAAAAAAGATGGAAAACAGCTTCCCACTTCTAAAGGGATAAGTTTATCTTCTGAACAATGGTCAACCTTCAAGAATAGTGTTCCTGCTATAGAGGAAGCTATCACAAAGTTGGAAGGAAGGATAAGATCAGAGCCTAATGGCAAGAAAAATAGAGAAGTTTCAAGTACAGTTGCTTGCAAGAGAAATGAAAAAGTTTCAACCTCAGTTGTTGATGTTCCTGTTGAGCTTGTTCCTATTGAGATAGTCCGTTTTGATGGGAAGAATTACCAAGTTTGGGCTCAACAAATGGAATTACTCTTGGAACAGTTAAAGATTAAATATGTGCTTACTAATCCATGCCCAAATGCTACATTAGGGGAAAGAGATGCTTGCACTGGAGAAATGGCTGAAAACAAAGCTGCTGAAAATAGATGGGTAATTGACAATTTAACATGTCGTCGCAACATCTTGAGCCATTTATCTGATAATCTATTCAACAAGTATGCAAAAAGAAAAATGAGTGCTAAGGAGTTATGGGAAGATTTAAAGTTTATTTATCTGTATGAGAAACATAGAACCAAGAGATATCAGGTGAAAAAATATATTGAAtttcaaatggttgatgaaaaaacagttgttgaccaagttcaagaaattaataaccttgcagactctattgccgcgtctggaatgcaaattgaggagaactttcatgttagtgtcatcatttcgaagcttccattatcatgggaagactttTGCATCAACTTAATGCGTGAGGAGCATCTACCTTTCTGGAAGTTAATGGAACTGATAACGAAAGAAGAAGAATCTCGCAATGGAATAAAAAAAAAAGGGTGA 1236 0.3447 MEAETRRKVEDMVLDILKKSNIQETTEFTIRVAASERLGVDLSDPHSKHFVRNIIESYLLSIATDEKPPQETTEVPVVIPKEPLEEEFTEALRVIKRRNDDSERFICQLSTKRNVVVRDFKGTTLVSIREFYKKDGKQLPTSKGISLSSEQWSTFKNSVPAIEEAITKLEGRIRSEPNGKKNREVSSTVACKRNEKVSTSVVDVPVELVPIEIVRFDGKNYQVWAQQMELLLEQLKIKYVLTNPCPNATLGERDACTGEMAENKAAENRWVIDNLTCRRNILSHLSDNLFNKYAKRKMSAKELWEDLKFIYLYEKHRTKRYQVKKYIEFQMVDEKTVVDQVQEINNLADSIAASGMQIEENFHVSVIISKLPLSWEDFCINLMREEHLPFWKLMELITKEEESRNGIKKKG 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03141 411 SUPERFAMILY ssDNA-binding transcriptional regulator domain 106 168 IPR009044 GO:0003677|GO:0006355
Car03g03141 411 PANTHER PBF68 PROTEIN 1 406 - -
Car03g03141 411 Gene3D Transcriptional Coactivator Pc4; Chain A 96 174 IPR009044 GO:0003677|GO:0006355
Car03g03141 411 Pfam Transcriptional Coactivator p15 (PC4) 107 157 IPR003173 GO:0003677|GO:0006355
Car03g03141 411 Pfam DEK C terminal domain 5 59 IPR014876 -
Car03g03141 411 Pfam gag-polypeptide of LTR copia-type 274 405 - -
Car03g03141 411 PANTHER PBF68 PROTEIN 1 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03141 Car-Chr3 76247078 76250647 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Car03g03141 Retrotran_gag_2 7.7e-15 CL0523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03141 - - cam:101512708 815.068