Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03140 ATGGACTCTTCATCCGGTGGCCGTCCTAAAGTGGCGGCGAAGCGAGGCAACGTCGCCAGAGAGAAGCACATGCCGCGGCTTGAGAATCAAATCCATAACGAAATTGAAGAGGCGAAACAACACACTTCCACCAGCATGAGAAAGAAAAGGAAGACCGTCGCCGATCTCGGTGGCGGATCGGAATCGGGACTGAATGGAAACTCGGCGAGAACGAAGAGAAAGAAGAAGAATTCGATTGATCAAGAGAAGGAAGGAGATTGTGGCAAGGTACTAATGGATGATCGTAACAAGGTCAACAAACCCAAAACTGAAGTCAAAGATACCAAACAACGGGTTGTATCTAGGAAAACCAAGGAGAGTAGTAGTTTGATGTGTCATCAGTGCCAGCGGAATGATAAGAGTGGTGTTGTCTTTTGTTCAAGTTGCAACAGAAAACGCTATTGTTACGAATGCATTGAGAACTGGTACCCAGGAAAAACCCGAGAGGAATTTGAGAATGTGTGTCCATTTTGTTGGGGAAATTGCAACTGCAAAGCTTGCTTGCGAGAGTTTCCTGTGCTAATGGACCGAGAAGTTGATGCCAGTGTCAAATTACAGCGTCTGTTGTACTTGCTATCTAAAGCTCTGCCAATTCTGAGGCATATCCACAGGGAGCAGAGCTTGGAATTAGAGGTTGAAACCAAAATAAGGGGTAGGCAACTGCAAGAAATTGACATAACAAGAACACAGCTAGATGAAAGTGAGCGCTTGTACTGTGACAATTGCAATACATCCATACATGGATTTTACCGTAGCTGCCCCAACGAAGGTTGCTCTTATGATCTCTGTATTGGGTGCTGTCAAGAGCTCAGAGAGGGTAACCAACCTGGAGGCATGGAGGCTGGAACATCTCATGAAAAATTTGAAGAAAGTTTTCACATTCACGATTCAACAAAAAATCAGAGTGAAACACATTGTAAAAGATATGGGTGGGAGAGTGAACTTGCACCTTCTAGTTTTCATTCTCAGGCTGACATGTTCTCTCCCTTCCCAGAATGGAAAGCTAATAGTGATGGTAACATTCCATGTCCTCCAAAGCAGCGTGGAGGTTGTGGTACTGCATTGCTGGAACTGAGACGCATTTACAAAGCTAATTGGGTAGCAAAACTGCTAAATAATGCTGAGGATCTCACTAGAAATTACACACCTCTGGATGTGGGTATTACTGAAAAGTGTTCTTTATGCCAGCTGTATTTGTTTGAAGGAAAAATCAATCCTGAAGTCAGGAGGGCAGCATTCCGGGATGACGGTAAAGATAACTTCTTATATAGCCCAAATGCCCTCAACATTTCTGATGATGAGATTGAGCACTTCCAGAGGCACTGGATGAGGGGAGAACCTGTGGTTGTGAGAAATGTTCTAGCCAAAACATCTGGTCTTAGTTGGGAACCAATGGTTATGTGGAGGGCCCTCAGAGAAACAGGTTCTAAAGTAAAGTTCAAAGAGGAAACACAAAGTGTGAAGGCCGTAGATTGCTTGGATTGGTGCGGGGTTGAAATTAATATACACCAATTTTTCCAAGGCTACCTAAAAGGTCGAATGCATAAAAATAAGTGGCCAGAAATGTTGAAGTTGAAAGATTGGCCTTCATCAACCTCTTTTGAAGAGCGTTTGCCTAGGCATGGCGCTGAATTCCTTGCTGCACTTCCGTACGTGGACTACACTGATCCAAAAACGGGTCTTTTAAATTTTGCCACTAAACTTCCTGCAGGTTCTCTGAAACCAGATTTGGGACCCAAAACATATATTGCTTATGGATTTTCTGAAGAGCTTGGCCGGGGAGATTCTGTGACAAAACTGCACTGTGACGTGTCTGATGCGGTCAATGTGCTGACACACACAAACAAGGTGGATATAGCTCCCTGGCAGAGAGAAAGCATAAATAAATTGAAGAAGGGATATGATAAAGAAGACGATTTTGAACTTCATTGTGGAGCATTAGCTAATGTTGAAGGAAAATCTAAAGCATTGGATCATGATCAAAAGGAAAAGAATGGAGTTGACGGGATTGCACCAAGTGTCCAAGTAGATCAATGCATTTCATCTATATCAGATGACTTGAACAGAAAGTTGGAAACACAGAACACAGAACAATGTGATGATAATGGAAAGAGCTCTTGCACCTGCAGAAATGTTGCTGTAAGGAACTCCTCTGTGGAAGCAAGTGTTAGTATAACATCATCTACTGAAGTTTCAGATTATTCCAGGACTTCCGAACTGGAACATGTTCAATCTGCAACCAGCTTAGCATCAACTAATACAAGCATAAAGAAAGATAGAATGAGAATTGATTTTTCAGATGGTAATGTGTCTGGTGATCCCAAGAGAGAGTCAAAACAAGGCACCGGAATAGACTCTTTGGACGCCAACAATGGAGCTGAGACTGTCCTTGGTGGTGCTGTTTGGGATATCTTCCGCCGGCAAGATGTCCCAAAGTTAGTTGAGTACTTAAGAGAGCACAAGAAGGAATTTCGTCATATCAACAATCAACCCATTGATTCAGTTGTACATCCCATTCATGATCAGACTATATTCTTAAATGAGAGACATAAGAAACAGCTTAAAAGAGAATTCAATGTTGAACCATGGACTTTTGAGCAACACCTTGGCGAGGCTGTTTTCATTCCAGCAGGATGTCCTCATCAAGTGAGAAATAGACAGTCTTGTATCAAGGTTGCGCTCGACTTTGTTTCTCCGGAAAATGTTGAAGAATGTTTACGACTAACTGAAGAATTTCGTTTACTCCCGAAGAACCACAGGGCCAAGGAGGACAAATTGGAGGTTAACAAGATGACCCTGTATGCTGTAAGTAGTGCTGTTCGAGAAGTTAAAGAACTGATGATGGCCAATAAGTAA 2895 0.4273 MDSSSGGRPKVAAKRGNVAREKHMPRLENQIHNEIEEAKQHTSTSMRKKRKTVADLGGGSESGLNGNSARTKRKKKNSIDQEKEGDCGKVLMDDRNKVNKPKTEVKDTKQRVVSRKTKESSSLMCHQCQRNDKSGVVFCSSCNRKRYCYECIENWYPGKTREEFENVCPFCWGNCNCKACLREFPVLMDREVDASVKLQRLLYLLSKALPILRHIHREQSLELEVETKIRGRQLQEIDITRTQLDESERLYCDNCNTSIHGFYRSCPNEGCSYDLCIGCCQELREGNQPGGMEAGTSHEKFEESFHIHDSTKNQSETHCKRYGWESELAPSSFHSQADMFSPFPEWKANSDGNIPCPPKQRGGCGTALLELRRIYKANWVAKLLNNAEDLTRNYTPLDVGITEKCSLCQLYLFEGKINPEVRRAAFRDDGKDNFLYSPNALNISDDEIEHFQRHWMRGEPVVVRNVLAKTSGLSWEPMVMWRALRETGSKVKFKEETQSVKAVDCLDWCGVEINIHQFFQGYLKGRMHKNKWPEMLKLKDWPSSTSFEERLPRHGAEFLAALPYVDYTDPKTGLLNFATKLPAGSLKPDLGPKTYIAYGFSEELGRGDSVTKLHCDVSDAVNVLTHTNKVDIAPWQRESINKLKKGYDKEDDFELHCGALANVEGKSKALDHDQKEKNGVDGIAPSVQVDQCISSISDDLNRKLETQNTEQCDDNGKSSCTCRNVAVRNSSVEASVSITSSTEVSDYSRTSELEHVQSATSLASTNTSIKKDRMRIDFSDGNVSGDPKRESKQGTGIDSLDANNGAETVLGGAVWDIFRRQDVPKLVEYLREHKKEFRHINNQPIDSVVHPIHDQTIFLNERHKKQLKREFNVEPWTFEQHLGEAVFIPAGCPHQVRNRQSCIKVALDFVSPENVEECLRLTEEFRLLPKNHRAKEDKLEVNKMTLYAVSSAVREVKELMMANK 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03140 964 CDD cupin_RmlC-like 850 910 - -
Car03g03140 964 Gene3D Cupin 436 717 - -
Car03g03140 964 Gene3D Cupin 723 935 - -
Car03g03140 964 ProSiteProfiles Ig-like domain profile. 592 737 IPR007110 -
Car03g03140 964 SMART cupin_9 551 926 IPR003347 -
Car03g03140 964 ProSiteProfiles JmjC domain profile. 570 926 IPR003347 -
Car03g03140 964 MobiDBLite consensus disorder prediction 773 795 - -
Car03g03140 964 MobiDBLite consensus disorder prediction 773 800 - -
Car03g03140 964 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 1 963 IPR045109 GO:0032454|GO:0033169
Car03g03140 964 ProSiteProfiles Zinc finger RING-type profile. 125 171 IPR001841 -
Car03g03140 964 MobiDBLite consensus disorder prediction 73 113 - -
Car03g03140 964 SUPERFAMILY Clavaminate synthase-like 448 943 - -
Car03g03140 964 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN-CONTAINING PROTEIN 1 963 - -
Car03g03140 964 Pfam JmjC domain, hydroxylase 811 909 IPR003347 -
Car03g03140 964 MobiDBLite consensus disorder prediction 1 113 - -
Car03g03140 964 MobiDBLite consensus disorder prediction 14 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03140 Car-Chr3 76232148 76243163 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Car03g03140 JmjC 2.1e-16 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03140 K15601 - vvi:100258626 1072.38