Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03115 ATGGGAAACAGTGAGGAAGAGAAGTCTACCAAGACTGAAAAGCCTTCTTCACCTGTAATCGTGGATCAAACCAACCAGACGAATGTTCATGTCTATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCGAGAGTCGCCATGCCACCGTACTACAACTCACCAGTGGCTTCTGGTCACACTCCTCATCCGTATATGTGGGGGCCACAGCCTATGATGCCACCTTATGGTCATCCTTATACAGCAATTTATCCTCATGGAGGGGTTTATGCTCACCCTGGAGTTCCTGTTGGGCCAAATCCACATAGCCAAGGAATTTCATCTTCACCTGCTACTGGAACTCCTTTGAGCATAGAGACACCTCCCAAATCATCTGGAAACACTGATCAGGGTCTGATGAAGAAATTGAAAGGGTTTGATGGACTTGCAATGTCAATAGGAAATGGCCATGTTGAGAGTGCAGAGCCTGGATCTGATAGCAGGCTATCACAGAGTGTGGATACCGACGGTTCCAGCGATGGAAGTGACGGCAATACTGCAGGGGCTAATCAAACAAGAAGGAAAAGAAAGCGTGAGGGAACACCAACCACTGACGGAGAAGGGAAAACTCACACACAAGGTAGTCAAGTTTCGAAAGAAATCGCAGCTTCTAATAAGACGATGGCAGTTGCCCCTGCTGGTGTTGCTGGGCATTTAGCTGGACCTGTAGTTTCTCCAGCAATGACGACTGCACTGGAGCTGAAAAATCCTTCAAGTGTTCATTCTAAAACAAATGTCACAAGTGCCCCGCAACCTTGTGCCGTATTGCCTGCAGAAACATGGTTACAGAATGAACGTGAGCTTAAGCGTGAGAGGAGGAAACAATCAAATCGAGAATCTGCTAGGAGATCCAGACTAAGGAAGCAGGCTGAGGCCGAAGAACTGGCACGAAAAGTTGAATCCTTGAATGCTGAGAGCGCGTCACTTAAATCAGAAATAAATCGACTGGCCGAGAGTTCTGAAAAACTGAGAATGGAAAATGCTGCATTAAGGGAAAAATTTAAAATTGCTCAACTGGGCCAACCAAAAGATATAATTTTGACCAGCATTGACAGCCAGAGGACTACACCTGTGGTTTAA 1119 0.4656 MGNSEEEKSTKTEKPSSPVIVDQTNQTNVHVYPDWAAMQAYYGPRVAMPPYYNSPVASGHTPHPYMWGPQPMMPPYGHPYTAIYPHGGVYAHPGVPVGPNPHSQGISSSPATGTPLSIETPPKSSGNTDQGLMKKLKGFDGLAMSIGNGHVESAEPGSDSRLSQSVDTDGSSDGSDGNTAGANQTRRKRKREGTPTTDGEGKTHTQGSQVSKEIAASNKTMAVAPAGVAGHLAGPVVSPAMTTALELKNPSSVHSKTNVTSAPQPCAVLPAETWLQNERELKRERRKQSNRESARRSRLRKQAEAEELARKVESLNAESASLKSEINRLAESSEKLRMENAALREKFKIAQLGQPKDIILTSIDSQRTTPVV 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03115 372 MobiDBLite consensus disorder prediction 183 198 - -
Car03g03115 372 Pfam Disordered region downstream of MFMR 129 257 - -
Car03g03115 372 SUPERFAMILY Leucine zipper domain 281 337 IPR046347 GO:0003700|GO:0006355
Car03g03115 372 MobiDBLite consensus disorder prediction 1 25 - -
Car03g03115 372 Pfam bZIP transcription factor 278 340 IPR004827 GO:0003700|GO:0006355
Car03g03115 372 MobiDBLite consensus disorder prediction 199 216 - -
Car03g03115 372 PANTHER G-BOX-BINDING FACTOR 3 1 368 - -
Car03g03115 372 MobiDBLite consensus disorder prediction 280 302 - -
Car03g03115 372 MobiDBLite consensus disorder prediction 95 133 - -
Car03g03115 372 Coils Coil 291 346 - -
Car03g03115 372 MobiDBLite consensus disorder prediction 157 182 - -
Car03g03115 372 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Car03g03115 372 MobiDBLite consensus disorder prediction 101 131 - -
Car03g03115 372 SMART brlzneu 278 342 IPR004827 GO:0003700|GO:0006355
Car03g03115 372 CDD bZIP_plant_GBF1 283 331 IPR045314 GO:0003700|GO:0006355
Car03g03115 372 Gene3D - 281 334 - -
Car03g03115 372 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 280 343 IPR004827 GO:0003700|GO:0006355
Car03g03115 372 MobiDBLite consensus disorder prediction 147 216 - -
Car03g03115 372 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 285 300 IPR004827 GO:0003700|GO:0006355
Car03g03115 372 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 368 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03115 Car-Chr3 76042368 76047907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03115 1 351 bZIP Transcription Factor Family AT2G46270 55.710 5.11e-114 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car03g03115 MFMR_assoc 6.9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03115 K09060 - gmx:100781875 591.652