Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03103 ATGAATTGCTTTCCTTGTTTTAGCTCTCAAAAGAGTAAGAAAAGCAATAGCAAGAGGGAGCATGGTGTTGCAACACCACAGGAAAATGTTGTTACCAGAACACCAGATGTTAAGAAACCAAGACCAGATGATCCAAACCAAGTTGACACATCAAATATTCAAGCACAAAATTTCACATTCAGAGAGTTGGCAATTGCAACAAAGAATTTCCGGCAAGAGTGTTTGATGGGTGAAGGTGGTTTTGGTAGAGTGTACAAAGGAACTATTCCCGCAACTGGACAGGTGGtagcagtgaaacaacttgacagaaatggggttcaaggcagtaaggaatttttggttgaggttttaatgttgagtctcttaaaccatgaaaatcttgtcaaactcattggttattgtgctgatggtgatcaacgtcttttggtatatgaattcatgccagggaactctctagaaactcgtctTCTTGAGCGAAAACCTGATCAACCTTCACTAGATTGGTATAGCAGAATGAAAATAGCATCTAATACTGCAAAAGGATTGTGGTACTTGCATGACAAGGCCAATCCTTCAGTTATATATAGGGATTTGAAATCGTCGAACATATTGCTAGATAATGATCTAAATGCAAAACTATCTGATTATGGACTCGCTAAACTAGCTGGTAAAGATAAGATGAACATTGTGCCTACAAGAGTCATGGGTACTTATGGTTATAGTGCTCCTGAGTATGTACGAACAGGTAACCTCACATTGAAATCAGATGTGTATAGTTTTGGAGTTGTCTTGCTAGAGCTCATAACCGGAAGACGAGCTGTTGATACCACAAGAGCACACGACGAGCAAAATCTAGTTTCATGGGCACAACCAATATTTAGAGATCCAAAAAGATATGCAGAACTTTCAGATCCAAATCTGAGTACACATTATCCAGAAAAAGATCTGAATCAAGTTGTTGCAATTGCAGCAATGTGCTTACAGGAGGAAGCAGCAGCTCGTCCTTTGATGAGTGATGTTGTAACTGCTTTGAGCTTTCTTTCAACTTCTCCTCCTCCAGAGGGTATTTCTGCAGCCCCTCTTCCACCTCCTACTAACTGCACCGCCCAAAAGAGTTTTGCCACCGCCAATGAAAGTGAGAGCGAAAGTGAGAGCGAAAGTTCTGTTCCCAAGGATGATAAGGCTATTGCAGCAGTTAGTGCAAAATACCATGAATGTGATGATGCCTCAGAAAATGAATATGATTATTATGAAAATGAAAACCAACATGATTATAGTCCACAAGATACTAAAGAAACAAAGGAGTCTCACTCCAAATCAAAGAAAGGAAACAAAAGCATTAGGAAAAAACATGGTGTAGATGGAAGTAGCAAAAAATCTTCTGCAAGCAAATCATCTTCTCTTCGCTCTGATAGCAGCAGCGAGGAGGAGTCACACGACGGAGATGGTCATTTAGATGTTCATCATTTTAATCACACAAGCATGGGGCCATCTGAGGAAGGAAGTTATCACCGTTTTGAACATTCCAGCAGCAGAGGATCAGATGATAAAAGTCTTCATTCACAATAG 1569 0.3569 MNCFPCFSSQKSKKSNSKREHGVATPQENVVTRTPDVKKPRPDDPNQVDTSNIQAQNFTFRELAIATKNFRQECLMGEGGFGRVYKGTIPATGQVVAVKQLDRNGVQGSKEFLVEVLMLSLLNHENLVKLIGYCADGDQRLLVYEFMPGNSLETRLLERKPDQPSLDWYSRMKIASNTAKGLWYLHDKANPSVIYRDLKSSNILLDNDLNAKLSDYGLAKLAGKDKMNIVPTRVMGTYGYSAPEYVRTGNLTLKSDVYSFGVVLLELITGRRAVDTTRAHDEQNLVSWAQPIFRDPKRYAELSDPNLSTHYPEKDLNQVVAIAAMCLQEEAAARPLMSDVVTALSFLSTSPPPEGISAAPLPPPTNCTAQKSFATANESESESESESSVPKDDKAIAAVSAKYHECDDASENEYDYYENENQHDYSPQDTKETKESHSKSKKGNKSIRKKHGVDGSSKKSSASKSSSLRSDSSSEEESHDGDGHLDVHHFNHTSMGPSEEGSYHRFEHSSSRGSDDKSLHSQ 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03103 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Car03g03103 522 SUPERFAMILY Protein kinase-like (PK-like) 56 370 IPR011009 -
Car03g03103 522 MobiDBLite consensus disorder prediction 354 392 - -
Car03g03103 522 SMART serkin_6 70 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g03103 522 MobiDBLite consensus disorder prediction 501 522 - -
Car03g03103 522 ProSiteProfiles Protein kinase domain profile. 70 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g03103 522 MobiDBLite consensus disorder prediction 421 522 - -
Car03g03103 522 Gene3D Transferase(Phosphotransferase) domain 1 147 351 - -
Car03g03103 522 PANTHER RECEPTOR KINASE-LIKE PROTEIN 1 453 - -
Car03g03103 522 MobiDBLite consensus disorder prediction 1 51 - -
Car03g03103 522 PANTHER OS07G0668900 PROTEIN 1 453 - -
Car03g03103 522 MobiDBLite consensus disorder prediction 421 440 - -
Car03g03103 522 CDD STKc_IRAK 76 344 - -
Car03g03103 522 Pfam Protein kinase domain 72 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g03103 522 MobiDBLite consensus disorder prediction 470 489 - -
Car03g03103 522 Gene3D Phosphorylase Kinase; domain 1 33 146 - -
Car03g03103 522 MobiDBLite consensus disorder prediction 363 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03103 Car-Chr3 75970419 75973115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03103 1 380 Glycoside Hydrolase AT3G07070 60.599 1.03e-166 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Car03g03103 Pkinase 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03103 - - gmx:100807682 669.848