Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03102 ATGTCTTGCCACCTTCTTTTTGCACTTTTCATTTTTTCAATTTTCATAAACTCTTCTCACCTCGTATCTCCTGCACCCAACCACACACAAGCAGGTACATGTGTATTGGATTTCAAAGCATACGAAAATGAATATATGCAATTTGTTGAATGTGGAGATGTGAAAGAGGATATAAGCAAGTGGGGTGCAGACGGTTTCCCAACCACACTATGCTGCAGAAATGCTCTCACACTTTTATCAGAAGCTATGGCCTCATCACTCCATAACTCATCAGGACAACTCTTCCTTTCTCAACAACAATTGCTAAACTGCAAAACTTCATTTCAACCACAACAAGGGATGTCACTCTCTTCATGTGGCTTTGATAACATTTACTTTGGTAGCTCCAAATGTTCAAGCTTAGTTTTGTTAGATGTTCAGGACTTGTCACAGTATTCAGATGTTTCCAAATGCAGCCATTTCGACCATTCGTTTGATGAGTCATGTGCTGATTGTACAAGTACAATAATGAGTGTCAGAGATGGTTTGTATGGTAAAGTAATGGACAAAGATGACAACAATGTTACTGAGAGAGCCATATGTGGAATAGCAGCTCTTGTTGCTGTTGCAGCTAAACAACAGGATGACCCTTTTCTTGCTGACAAATTCTTGCGTTGCTTGCCACTTACAACAAGATATAATAAGAAACCGGCAATTAAGAAAGTGGTGTTGGGAGTGTTGGTGGTAGCTATCCTTGCATTACTGATTATTGGTTTCCTCATAAAATGTGTATCAAAGAAGAAGCCAATAAAGCATGTTCAACTGAAACAAATAGCTACATGGTCAGGACTATACTGGTTCACAAAAACAgaaattgaaaatgcaatgaattatgaaaatgaaaaGATAAACCTTGGACGTGGGAGTGCTGGTGAAGTGTTTAGAGGTGTTCTGCCAAGTGGTCAAGTTGTGGCTATCAAGCATTTGACTAAGAGTAACACTTCTAGTTCTGATTCTTTCACGCGAGAACTCGCTGGTCTTTCAAGGCTTCGTCATCCCAACTTGGTTTGCTTGTTCGGTTGTTGTATGGAAGATGGTGAGAGATATTTGGTTTATGAATTTTGTGCTAGTGGAAATCTCGCTCAACATCTCTTGAGAAGAGATAGCCATTTGACATGGGAAGCAAGAGTGAGGATATTGAGAGAATGTTCATTTGCGCTCAAGTATCTCCATCATCACATAGAGGGTTGTGTTGTCCATAGAGATATCAAGCTTACAAACATTCTTTTGACTGAGAAATACGAAGCCAAATTGTCTGATTTTGGATTGTCAAAGATGATGGGGATGGAAGAGAGCAAGGTTTTTACAGATGTTAGAGGAACCATAGGTTACATGGATCCAGAGTACATGAGTAATGCCAAGCTAACATGTGCAAGTGATGTATACAGTTTTGGTATTGTTGCTTTGCAAATTTTGTCAGGACAGAAAGTTATAGAATTGGATCTTGATGCCAGAGATCAACTCACCAGAAAGGCAAGAGATGTGAGTATGGGAAAACGTCCACTGTCGGATTTTGTAGACTCGCGGCTAAAGGGACAAGTTGATAAGGCAGATTTTGGAGCCATTTTACAGATTGCAGTACTTTGTGTTGCCAAATCAAGCACAGGTCGGCCATCCATCGAGGTTGTTTTTGACGAATTGGACAAGGTCTACAGAGACATGGAGGCACGCAAGAAAGCGACCCCAACAACATCAACCTCTAGCTCTAATTGA 1752 0.3984 MSCHLLFALFIFSIFINSSHLVSPAPNHTQAGTCVLDFKAYENEYMQFVECGDVKEDISKWGADGFPTTLCCRNALTLLSEAMASSLHNSSGQLFLSQQQLLNCKTSFQPQQGMSLSSCGFDNIYFGSSKCSSLVLLDVQDLSQYSDVSKCSHFDHSFDESCADCTSTIMSVRDGLYGKVMDKDDNNVTERAICGIAALVAVAAKQQDDPFLADKFLRCLPLTTRYNKKPAIKKVVLGVLVVAILALLIIGFLIKCVSKKKPIKHVQLKQIATWSGLYWFTKTEIENAMNYENEKINLGRGSAGEVFRGVLPSGQVVAIKHLTKSNTSSSDSFTRELAGLSRLRHPNLVCLFGCCMEDGERYLVYEFCASGNLAQHLLRRDSHLTWEARVRILRECSFALKYLHHHIEGCVVHRDIKLTNILLTEKYEAKLSDFGLSKMMGMEESKVFTDVRGTIGYMDPEYMSNAKLTCASDVYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSMGKRPLSDFVDSRLKGQVDKADFGAILQIAVLCVAKSSTGRPSIEVVFDELDKVYRDMEARKKATPTTSTSSSN 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03102 583 PANTHER OS01G0253100 PROTEIN 43 569 IPR045271 GO:0004714|GO:0006468
Car03g03102 583 ProSiteProfiles Protein kinase domain profile. 292 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g03102 583 Gene3D Phosphorylase Kinase; domain 1 263 367 - -
Car03g03102 583 Gene3D Transferase(Phosphotransferase) domain 1 369 581 - -
Car03g03102 583 Pfam Protein kinase domain 296 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g03102 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Car03g03102 583 SMART serkin_6 291 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g03102 583 SUPERFAMILY Protein kinase-like (PK-like) 274 565 IPR011009 -
Car03g03102 583 Pfam SPARK 29 187 IPR043891 -
Car03g03102 583 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 40 43 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03102 Car-Chr3 75967170 75970376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03102 280 574 Receptor kinase-like Gene Family AT1G16260 36.364 2.44e-56 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Car03g03102 Pkinase 4.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03102 - - mtr:MTR_7g116650 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03102 03 75967170 75970376 Car07g02782 07 53390782 53393714 PCT