Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03092 ATGGAACCCAATGACAACCAACTAAGCTCTTTTTTccaccaccataaccaccaccaccaacaacagcaccaccaacaacaacaaccacAGGGTAACTCAACCACCGTAGTCTCAGCCACTACCACCACCGCAGCTCCGACTAACGGTCTTTTATCAAACACAGATGGATCCCACATACTGTACCCTCATTCAGTGGCTTCTGCTGTGTCTTCTCAGCTTGAACCAGCTAAGAGGAAACGAGGAAGACCTAGAAAGTACGGAACACCGGAACAAGCTCTCGCTGCTAAAAAAGCCTCTACGTCGTCGTTTTCATCTACTCCCGCTGGTGCTGACAATAGCAGCAAGAATACCACACACTCTTTTTCTCCTTCTTCTTTCTCTTCTAAGAAATCTCATTCTCTCTCTCTAGGTAATGCAGGACAAGGTTTCAGTGCACATGTCATTGCTGTTGCTGCTGGTGAGGATGTTGGCCAGAAAATTATGCAATTTATGCAACAACATAGGGGTGAGATATGCATTCTGTCTGCATCTGGTTCCATCTCTAATGCCTCTCTTCGTCAACCGGCATCTTCAGGAGGAAATATTACATATGAGGGTCGATTTGATATTATTTCACTTACCGGTTCTTATGTTCGTAATGAAACCGGAGGGCGAAGTGGCGGTCTCAGTGTATGCTTGTCTAATTCTGATGGACAAATCATAGGTGGTGGTGTTGGTGGGCCACTTAAAGCTGCCGGTCCAGTTCAGGTCATTGTTGGTACATTTTTTATCGACACCCAGAAGGATACAAGTGCTGGCATAAAAGGCGATGCCTCTACCAGCAAGTTGCCATCACAGGTTGGTGAATCAGCATCGAATTTAGGTTTCCGCCAAGCAGTTGACTGTTCCAGCGGGAATCCAATTCGGGGAAATGATGAACATCAAGCTATGGGGGGAAGTCATTTCATGATTCAACAGCTTGGTTTGCATGTGACCCCTCCAAGGCCCACTGACTGGGGGAGTCATCCAGATTCAAGAAATGTCGGCTATGATTTGTCAGGAAGAACAGGTCACGGGTCTCACCAGTCTCCTGATAATGGAGGCTATGACCAAATTCCTGATTGA 1104 0.4411 MEPNDNQLSSFFHHHNHHHQQQHHQQQQPQGNSTTVVSATTTTAAPTNGLLSNTDGSHILYPHSVASAVSSQLEPAKRKRGRPRKYGTPEQALAAKKASTSSFSSTPAGADNSSKNTTHSFSPSSFSSKKSHSLSLGNAGQGFSAHVIAVAAGEDVGQKIMQFMQQHRGEICILSASGSISNASLRQPASSGGNITYEGRFDIISLTGSYVRNETGGRSGGLSVCLSNSDGQIIGGGVGGPLKAAGPVQVIVGTFFIDTQKDTSAGIKGDASTSKLPSQVGESASNLGFRQAVDCSSGNPIRGNDEHQAMGGSHFMIQQLGLHVTPPRPTDWGSHPDSRNVGYDLSGRTGHGSHQSPDNGGYDQIPD 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03092 367 SUPERFAMILY AF0104/ALDC/Ptd012-like 142 256 - -
Car03g03092 367 MobiDBLite consensus disorder prediction 323 367 - -
Car03g03092 367 Pfam Plants and Prokaryotes Conserved (PCC) domain 145 255 IPR005175 -
Car03g03092 367 MobiDBLite consensus disorder prediction 23 37 - -
Car03g03092 367 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 359 IPR039605 GO:0003680
Car03g03092 367 MobiDBLite consensus disorder prediction 68 133 - -
Car03g03092 367 MobiDBLite consensus disorder prediction 1 37 - -
Car03g03092 367 MobiDBLite consensus disorder prediction 94 133 - -
Car03g03092 367 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 1 359 - -
Car03g03092 367 Gene3D - 144 269 - -
Car03g03092 367 ProSiteProfiles PPC domain profile profile. 139 276 IPR005175 -
Car03g03092 367 CDD DUF296 146 255 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03092 Car-Chr3 75814970 75819572 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03092 33 367 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 50.409 1.49e-89 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03092 - - gmx:100809675 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03092 03 75814970 75819572 Car03g03092 03 75814970 75819572 ECH