Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03091 ATGTCTAACCCGTGGTGGAGCAACACCATGGCTCTTCCCGGAGCCGACAACTCTTCCCCCAAGAAAAGTTTTTCCCTGAACAATACCACATCTACAGCAACTTCAAGTCATAAAGAAGAGAGAGAAAATAGCGAAGAGACCAAAGAAGGAGCTATCGAAGTGGGCCCAACTCGTCGGTCCAGGGGTCGTCCATTGGGCTCAAAGAACAAGCCCAAATCCCAAGTATTTGTAACTAGAGACGGCCCACATGCACTTCGAAGCCACGTCATTGAAGTAGCAAACGGAGCTGACATAACAGATTGCTTGATCGAGTTCTCAAGAAGGCACCAAAGAGGTGTATGCGTTCTCAGCGGAACCGGCGCCGTCATAAACGTCCATCTCCGACAACCGACAATTCCCTCCACCGTGATGGCACTTCATGGCCGGTTCGAGATCATTTCACTCTCCGGTTCATTTCTCCCCGGAACTTCTCTTCCGGGATCCACAGGGCTTACAGTTTGCGTGGCGGGAATTCAGGGACAAGTTATGGGAGGTGCTGTTGTGGGACCCCTTGTTGCATCTGGTACGGTTGTGATAATGGCGGCTACATTTTCCAATGCTATGTATGAAAGATTACCGTTACCTATTCAAGAAGAAGATCGTCGAGAGGGAGCACCCTTTTGA 663 0.4992 MSNPWWSNTMALPGADNSSPKKSFSLNNTTSTATSSHKEERENSEETKEGAIEVGPTRRSRGRPLGSKNKPKSQVFVTRDGPHALRSHVIEVANGADITDCLIEFSRRHQRGVCVLSGTGAVINVHLRQPTIPSTVMALHGRFEIISLSGSFLPGTSLPGSTGLTVCVAGIQGQVMGGAVVGPLVASGTVVIMAATFSNAMYERLPLPIQEEDRREGAPF 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03091 220 CDD DUF296 86 197 IPR005175 -
Car03g03091 220 Pfam Plants and Prokaryotes Conserved (PCC) domain 86 199 IPR005175 -
Car03g03091 220 SUPERFAMILY AF0104/ALDC/Ptd012-like 84 208 - -
Car03g03091 220 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 17 214 - -
Car03g03091 220 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 17 214 IPR014476 GO:0003680
Car03g03091 220 MobiDBLite consensus disorder prediction 1 80 - -
Car03g03091 220 MobiDBLite consensus disorder prediction 35 56 - -
Car03g03091 220 ProSiteProfiles PPC domain profile profile. 82 220 IPR005175 -
Car03g03091 220 PIRSF ESCAROLA 7 219 IPR014476 GO:0003680
Car03g03091 220 MobiDBLite consensus disorder prediction 1 34 - -
Car03g03091 220 Gene3D - 85 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03091 Car-Chr3 75808250 75808920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03091 1 213 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 54.260 2.03e-66 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03091 - - egr:104415381 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03091 03 75808250 75808920 Car04g00252 04 2630842 2631876 ECH
Car03g03091 03 75808250 75808920 Car03g03091 03 75808250 75808920 ECH