Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03088 ATGGCTTCTTGCAATATTGCTCTCCATGCAATAGGAATCACTTTCTTACTCCAAATAATCACTTCTGTAAAGCCACTCTCATTTCATTACAACCAAAGCTTTAAATATGATGATGTGAAGCTAGAAGGAGATGCTTCTTTGTTATATCCATACATCCAACTCACAGCAACCTCAAGGTACCAAAGCAACGCTTACAGCGTCGGTCGAGTAACGTCATTCGAGCCAGTGCAACTTTGGGACAGAACCTCAAGAAAACTCACTGATTTCACCACACAATTTTCCTTTACAATTTTCTCAAATGAAACTGGTTTTGGAGATGGATTAGCATTTTTCTTTGCAGATCCAAAACTTCCACTTCATAACCATATTCAACAAGGTGGTGGACTTGGTCTTGTGAATGATGACCAAATAATGAACTCTACTGAATATTCATTTGTAGCAGTGGAGTTTGACACTCACCAAAATTCTTGGGATCCATCAGGTACACATGTAGGTATAAATTTCAACTCTATGAAATCTCAAATAACTAAACCATGGTTTATTGATATTAGGAATAAGAAGACTTATTATTGTAAAATTGAGTACAATTCAAGTGCTCATAATTTGAAAGTTTCTTTCACTGGAAACATAATCAATGGTAAGCCTATTAAAAAAAGTTACCTCTCATACAATGTTGATTTGAGAGATTACTTACCTGATAAGGTTATTTTTGGATTCTCAGCTGCTACAGGATATATGTTTGAAATGAATACATTAAAATCATGGTCATTTAATTCAACTTTACAAAGTCATCATGATAATATACCTCAAATAGCAAATCCTGCTCCTTCACCAATTAAAATTAGCCCTAAAATAGATAGCAACAAAGGTACTATATGGATTGGTCTAGGAGTTGGTGTAGTTGTTGCATCAAGTTTCCTTATTTTAGGATGGTTTTGTATTTTAATGTGGAAAAGGGCTAAAATGAAAAAAGAAGATTCAACTTTTGACCTAAAAATGGATGATGAGTTCCAAAAGGGAACAGGACCAAAAAGGTTTTGTTACAATAAATTGGCGAGTGCAACGAATAACTTTGAAGAATCACAAAAGATTGGACAAGGTGGTTTTGGTGTTGTTTATAAAGGCTATTTAAAAGACATAGATTCAAATGTTGCTATAAAGAGAATATCAAGAGAATCCAAACAAGGAATAAAGGAATATGCAACTGAGGTGAAAATCATTAGCCAACTAAGGCATAGAAATTTAGTACAACTAATTGGTTGGTGTCATAGAAAAAAAGACTTACTCCTTATATATGAATTCATGCAAAATGGTAGCTTAGATTCACACTTATATCGCGGAAAAAGCGTATTAACATGGCATATGAGGTACAACATTGCAATGGATTTAGCTTCAGCGTTGTTGTATCTTCATGAAGAATGGGAACAATGCGTGCTACATAGAGACATTAAATCAAGCAACATTATGTTGGACTCAAATTTCAATGCTAAAGTTGGCGATTTCGGGTTGGCAAGACTAGTTGATCATGAAAAAGGCTCACAAACAACGGTTATAGCTGGTACAATGGGATATTTAGCACCTGAATATTTCACAACAGGTAAAGCTACTAAGGAATCTGATATATATAGTTTTGGAATTGTTTCATTGGAGTTAGTTAGCGGAAGAAAACCAGTTGATCTTAATGCAAAGGAAGACCAAATGGCTATATATGATTGGGTTTGGGAACTTTATAGATTAGGAAGGTTTGTTGAAGTTGTTGATACAAAACTTGGGGGTGTGTTTGATGAGATGAAAATGGAACGTTTAGTTGTTGTTGGTCTTTGGTGTGCTAATCCTAATTATTCATTAAGGCCAAGTGTTAGACAACTGATTCAAGTGCTTAAATTTGAAGCTGCTTTACCAATTCTACCCCTGCAGAAGATGAATGATTCAAGTTATTATGCTCCTACAAAAATGAACACAGTTTTTGGTCCAGTTTCTTCTTCCTCTGCAGTTTATTCATACCCGATCTGTGTCTAG 2019 0.3487 MASCNIALHAIGITFLLQIITSVKPLSFHYNQSFKYDDVKLEGDASLLYPYIQLTATSRYQSNAYSVGRVTSFEPVQLWDRTSRKLTDFTTQFSFTIFSNETGFGDGLAFFFADPKLPLHNHIQQGGGLGLVNDDQIMNSTEYSFVAVEFDTHQNSWDPSGTHVGINFNSMKSQITKPWFIDIRNKKTYYCKIEYNSSAHNLKVSFTGNIINGKPIKKSYLSYNVDLRDYLPDKVIFGFSAATGYMFEMNTLKSWSFNSTLQSHHDNIPQIANPAPSPIKISPKIDSNKGTIWIGLGVGVVVASSFLILGWFCILMWKRAKMKKEDSTFDLKMDDEFQKGTGPKRFCYNKLASATNNFEESQKIGQGGFGVVYKGYLKDIDSNVAIKRISRESKQGIKEYATEVKIISQLRHRNLVQLIGWCHRKKDLLLIYEFMQNGSLDSHLYRGKSVLTWHMRYNIAMDLASALLYLHEEWEQCVLHRDIKSSNIMLDSNFNAKVGDFGLARLVDHEKGSQTTVIAGTMGYLAPEYFTTGKATKESDIYSFGIVSLELVSGRKPVDLNAKEDQMAIYDWVWELYRLGRFVEVVDTKLGGVFDEMKMERLVVVGLWCANPNYSLRPSVRQLIQVLKFEAALPILPLQKMNDSSYYAPTKMNTVFGPVSSSSAVYSYPICV 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03088 672 SMART serkin_6 358 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g03088 672 CDD STKc_IRAK 364 628 - -
Car03g03088 672 PANTHER - 14 667 - -
Car03g03088 672 Pfam Protein kinase domain 358 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g03088 672 Pfam Legume lectin domain 26 267 IPR001220 GO:0030246
Car03g03088 672 ProSiteProfiles Protein kinase domain profile. 358 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g03088 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Car03g03088 672 ProSitePatterns Protein kinases ATP-binding region signature. 364 387 IPR017441 GO:0005524
Car03g03088 672 Gene3D Phosphorylase Kinase; domain 1 343 434 - -
Car03g03088 672 Gene3D - 24 273 - -
Car03g03088 672 PANTHER LECTIN RECEPTOR KINASE 14 667 - -
Car03g03088 672 Gene3D Transferase(Phosphotransferase) domain 1 435 647 - -
Car03g03088 672 ProSitePatterns Legume lectins alpha-chain signature. 231 240 IPR000985 -
Car03g03088 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 270 IPR013320 -
Car03g03088 672 CDD lectin_legume_LecRK_Arcelin_ConA 26 261 IPR001220 GO:0030246
Car03g03088 672 ProSitePatterns Legume lectins beta-chain signature. 146 152 IPR019825 -
Car03g03088 672 SUPERFAMILY Protein kinase-like (PK-like) 343 656 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03088 Car-Chr3 75783060 75785078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03088 67 647 Receptor kinase-like Gene Family AT5G10530 47.797 7.44e-176 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car03g03088 Pkinase 7.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03088 - - gmx:100814713 964.911