Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03076 ATGAGGATTATGATAAAAGGAGGTGTTTGGAAAAACACCGAAGATGAAATTCTGAAAGCTGCTGTTATGAAATATGGTAAAAATCAATGGGCTCGTATCTCTTCACTTCTTGTTCGCAAATCTGCTAAACAATGTAAAGCTCGTTGGTATGAATGGTTAGATCCTTCCATTAAGAAAACTGAATGGACTAGAGAAGAAGATGAGAAACTTCTTCATCTTGCTAAGCTTATGCCTACTCAATGGAGAACCATTGCTCCCATTGTTGGCCGAACTCCTTCGCAGTGTCTTGAAAGGTACGAGAAACTCCTTGATGCTGCTTGTGTTAAGGATGATAACTATGAGCCTGGTGACGATCCTCGGAAGTTGCGGCCTGGGGAGATTGACCCAAATCCTGAGTCAAAACCTGCTCGTCCTGATCCTGTTGATATGGATGAGGACGAGAAGGAGATGCTTTCCGAAGCGCGTGCAAGGTTGGCTAATACGAAGGGTAAGAAAGCGAAAAGGAAAGCTAGGGAAAAACAGCTTGAGGAAGCTAGGAGGCTTGCTTCTTTACAGAAGAAGAGAGAATTGAAGGCTGCTGGAATTGATGTTAGGCAGCGGAGGAGAAAAAGGAGAGGAATTGATTATAATGCGGAAATTCCCTTTGAGAAGAGGCCTCCTTCGGGTTTTTATGATCCTACTGATGAGGATAGGCCGGTGGAGCAGCCCTCATTCCCTACTACTATTGAAGAACTTGAGGGTAAAAGAAGGATTGATGTTGAGGCGCAGTTAAGAAAGCAAGACGTTGCAAGGAATAAGATCGCAGAGAGGCAGGATGCCCCGGCTGCTATTCTGCATGCTAACAAGCTGAATGACCCAGAAACAGTTAGGAAGAGATCGAAACTGATGCTTCCACCACCCCAGATTTCTGACCAAGAATTGGATGAAATTGCAAAGTTGGGTTATGCCAGTGACCTTGTGGGCAGCGAGGAATTCAGTGAAGGCAGCAGTGCTACACGCGCTCTTCTCTCTAATTATCCACAAACACCCAACCAAGCAATGACTCCTTTAAGAACTCCTCAGAGAACACCAGCTAGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATTTGGCCAGACTTAGGGAGTCTCAGACACCACTGTTGGGAGGAGAGAACCCGGAGTTGCATCCTTCGGATTTTTCTGGGGTCACTCCCAAGAAAAAGGAAATTCACACTCCAAACCCACTGCTGACTCCCTCTGCAACCCCTGGAAGTGCAGGCGGCCTTACTCCCAGAAGTGGTATGACGCCTGCTAGGGATGGTTTTTCTTTTGGCATGACTCCAAAAGGAACTCCTCTCAGGGATGAGCTGCATATCAATGAAGAAATGGAGATGCATGACAGTGCTAAACTCGAGCTACGGAGACAAGCTGATATGAAAAAAAGTTTGCGCTCTGGTTTAAGCAGCCTTCCACAACCCAAAAATGAGTACCAGATAGTGATGCAACCAGTTCAAGAAGATGCTGATGAGCCTGAGGAGAAGATCGAAGAGGATATGTCTGATAGAATTGCTAGAGAGAAGGCAGAAGAAGAAGCACGACAGCAGGCATTACTTAGAAAACGATCAAAAGTCCTTCAAAGGGAACTTCCTAGGCCTCCTCCAGCATCTTTGGAGCTTATTAGAAACTCCTTGATAAGAGCTGATGGGGACAAGAGTTCATTTGTTCCGCCAACCTCAATTGAGCAAGCCGATGAGATGATTAGAAAGGAACTTCTAACCTTACTGGAGCATGATAATGCTAAGTATCCACTTGATGATATAGTGATTAAGGAGAGAAAAAAGGGGGCCAAACGAGCAGCAAATGGACCTACTATCCCTGTGATAGAAGATTTTCAGGAAGATGAGATGAAAGATGCTGATAAGTTGATAAAAGATGAAGCCCAGTATCTTCGTGTGGCAATGGGGCATGAAAATGATTCCCTTGATGAATTTGTTGAAGCACATACAACTTGCATTAATGATTTAATGTACTTTGTCACCCGTAATGCCTATGGTTTATCAAGTGTTGCGGGAAACATGGAGAAGCTAGCAGCTTTGCAGAATGAATTTGAGAATGTAAGAAGTAAGTTGGATGATGGTAAGGAGAAAATGATACGACTTGAGAAGAAGGTTACAGTACTCACGCAAGGATATGAGACGAGATCAAAAAAAGGTCTCTGGCCTCAAATTGAGGCCACTTTCAAGCAGATGGACGTGGCTGCAACAGAATTTGAGTGTTTTCAAGCTTTAAAAAAGCAGGAGCAGCTAGCAGCATCGCATAGGATTAACAATCTTTGGTCTGAAGTTCAAAAGCAAAAGGAACTTGAGAGAACTTTACAGAAGAGGTATGGGGATCTTATGGCAGACTTGGAAAGGACCCAAAATGTAATAGAGCAGTTCAGGGTACAAGCACAACTACAAGAAGAAATTGAAGCAAAGAGTTGTGCACTTGAGGGTAATGAGGTCAAGGCTGATGAAATTAATGTGCATGGTGTAGAAGACGTACAAACACAACAAGAAAAAGCTGAAGCAAAGAATCAGGTGCTTGAAAGTACAGAAGCCACTGCCGATGAAATTAATGTGCAGGGTACAGAAAATTGTGAAGCGGCACCCCTCTCAGCTGACCAGCAAATAGTCGCCGTGCATGATCAGGACACTTCTAGCTCCAAAAATGATATGGATGTGGAATTGCCAGATGCACCTGCTGCAGAGGATGAGAGTGCAAAAATTGAAGAAGCTTGTATTGAAAACAAAGAGACCACACTAGATATGAGTGCTGCAGTGGAAATAAAAAGTAATGAGGGAAATGAAGAGGGTCAAGATGTTCAAATTCCAGATGAGGTTATGGAATCTGCTAATCAACCTGATAATAGCACAAGAGAATCTACGCTTGATGACATGCAAGTTTCTGAAGGTAAAAATGATGAAGCTAATTAA 2958 0.4351 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDDNYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDVRQRRRKRRGIDYNAEIPFEKRPPSGFYDPTDEDRPVEQPSFPTTIEELEGKRRIDVEAQLRKQDVARNKIAERQDAPAAILHANKLNDPETVRKRSKLMLPPPQISDQELDEIAKLGYASDLVGSEEFSEGSSATRALLSNYPQTPNQAMTPLRTPQRTPASKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKKEIHTPNPLLTPSATPGSAGGLTPRSGMTPARDGFSFGMTPKGTPLRDELHINEEMEMHDSAKLELRRQADMKKSLRSGLSSLPQPKNEYQIVMQPVQEDADEPEEKIEEDMSDRIAREKAEEEARQQALLRKRSKVLQRELPRPPPASLELIRNSLIRADGDKSSFVPPTSIEQADEMIRKELLTLLEHDNAKYPLDDIVIKERKKGAKRAANGPTIPVIEDFQEDEMKDADKLIKDEAQYLRVAMGHENDSLDEFVEAHTTCINDLMYFVTRNAYGLSSVAGNMEKLAALQNEFENVRSKLDDGKEKMIRLEKKVTVLTQGYETRSKKGLWPQIEATFKQMDVAATEFECFQALKKQEQLAASHRINNLWSEVQKQKELERTLQKRYGDLMADLERTQNVIEQFRVQAQLQEEIEAKSCALEGNEVKADEINVHGVEDVQTQQEKAEAKNQVLESTEATADEINVQGTENCEAAPLSADQQIVAVHDQDTSSSKNDMDVELPDAPAAEDESAKIEEACIENKETTLDMSAAVEIKSNEGNEEGQDVQIPDEVMESANQPDNSTRESTLDDMQVSEGKNDEAN 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03076 985 MobiDBLite consensus disorder prediction 157 176 - -
Car03g03076 985 Coils Coil 839 862 - -
Car03g03076 985 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Car03g03076 985 Gene3D - 59 114 - -
Car03g03076 985 Coils Coil 167 187 - -
Car03g03076 985 SMART sant 6 55 IPR001005 -
Car03g03076 985 SMART sant 58 105 IPR001005 -
Car03g03076 985 MobiDBLite consensus disorder prediction 338 358 - -
Car03g03076 985 Pfam Myb-like DNA-binding domain 10 70 - -
Car03g03076 985 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Car03g03076 985 MobiDBLite consensus disorder prediction 932 985 - -
Car03g03076 985 CDD SANT 10 53 IPR001005 -
Car03g03076 985 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Car03g03076 985 MobiDBLite consensus disorder prediction 213 239 - -
Car03g03076 985 CDD SANT_CDC5_II 55 106 - -
Car03g03076 985 MobiDBLite consensus disorder prediction 380 422 - -
Car03g03076 985 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Car03g03076 985 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 799 - -
Car03g03076 985 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Car03g03076 985 MobiDBLite consensus disorder prediction 110 150 - -
Car03g03076 985 MobiDBLite consensus disorder prediction 957 972 - -
Car03g03076 985 Pfam pre-mRNA splicing factor component 406 656 IPR021786 -
Car03g03076 985 Coils Coil 690 717 - -
Car03g03076 985 Gene3D - 5 58 - -
Car03g03076 985 MobiDBLite consensus disorder prediction 338 355 - -
Car03g03076 985 MobiDBLite consensus disorder prediction 890 914 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03076 Car-Chr3 75697942 75704163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03076 1 818 MYB-Related Transcription Factor Family AT1G09770 75.912 0.0 1229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car03g03076 Myb_Cef 5e-63 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03076 K12860 - gmx:100790369 1473.37