Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03075 ATGAACAAGCGTTCATTTAAGTATGCCTGGGTTCTTGACAAGCTCAAGGCTGAGCGTGAAAGAGGTATCACAATTGACATTGCTCTGTGGAAGTTTGAGACAACTAAGTATTACTGCACCGTCATTGATGCCCCCGGACACAGAGATTTCATTAAGAACATGATTACTGGAACATCCCAAGCTGATTGTGCTGTCCTTATCATTGATTCCACTACTGGTGGTTTTGAAGCTGGTATTACTCCAAGGCTAGAAAAAATTCCATTTGTTCCCATCTCTGGTTTTGAGGGAGATAACATGATTGAGCGCTCTACAAACCTTGACTGGTACAAGGGTCCAACCCTTCTTGAGGCCCTTGACCAAATCAATGAGCCTAAGAGGCCATCAGACAAGCCCCTCCGATTACCACTTCAGGATGTCTACAAGATTGGAGGAATTGGTACTGTGCCTGTGGGGCGTGTCGAGACTGGTGTCTTGAAACCTGGATTTGTCGTGACTTTTGCGCCCACTGGACTGTCAACTGAAGTCAAGTCTGTTGAGATGCATCATGAAGCTCTCACTGAGGCCCTTCCTGGTGACAATGTTGGATTTAATGTTAAGAATGTTGCTGTCAAGGATCTCAAGCGTGGTTACGTTGCCTCAAACTCCAAGGATGACCCTGCCAAGGAGGCTGGTAACTTTACATCCCAAGTTATCATCATGAATCACCCTGGCCAGATTGGTAATGGTTATGCCCCTGTTCTTGACTGCCACACCTCCCACATCGCCGTCAAGTTTGCTGAGCTTATTACCAAGATTGACAGGCGTTCTGGTAAGGAGATTGAGAAGGAGCCGAAATTCCTGAAGAATGGCGATGCTGGTCTTGTGAAGATGATTCCAACCAAGCCCATGGTGGTTGAGACTTTTGCTGAGTATCCTCCTCTTGGGCGTTTTGCTGTCAGAGACATGCGTCAAACTGTGGCTGTGGGAGTCATCAAGAGTGTGGAGAAGAAGGAACCTAGTGGAGTTAAGCCAAAGAAGAAGTGA 1023 0.4673 MNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGITPRLEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGFVVTFAPTGLSTEVKSVEMHHEALTEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAGNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELITKIDRRSGKEIEKEPKFLKNGDAGLVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVIKSVEKKEPSGVKPKKK 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03075 340 CDD EF1_alpha_II 128 218 - -
Car03g03075 340 PANTHER ELONGATION FACTOR 1-ALPHA 84 338 - -
Car03g03075 340 PANTHER ELONGATION FACTOR 1-ALPHA 1 80 - -
Car03g03075 340 Pfam Elongation factor Tu domain 2 146 211 IPR004161 GO:0005525
Car03g03075 340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 147 IPR027417 -
Car03g03075 340 Gene3D Translation factors 127 214 - -
Car03g03075 340 CDD EF1_alpha_III 221 324 - -
Car03g03075 340 Pfam Elongation factor Tu C-terminal domain 220 327 IPR004160 -
Car03g03075 340 PANTHER TRANSLATION FACTOR 1 80 - -
Car03g03075 340 PANTHER TRANSLATION FACTOR 84 338 - -
Car03g03075 340 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 194 IPR000795 GO:0003924|GO:0005525
Car03g03075 340 Pfam Elongation factor Tu GTP binding domain 9 73 IPR000795 GO:0003924|GO:0005525
Car03g03075 340 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 224 327 IPR009001 -
Car03g03075 340 SUPERFAMILY Translation proteins 124 219 IPR009000 -
Car03g03075 340 Gene3D - 1 80 IPR027417 -
Car03g03075 340 Gene3D - 81 124 IPR027417 -
Car03g03075 340 PRINTS GTP-binding elongation factor signature 20 28 IPR000795 GO:0003924|GO:0005525
Car03g03075 340 PRINTS GTP-binding elongation factor signature 40 50 IPR000795 GO:0003924|GO:0005525
Car03g03075 340 PRINTS GTP-binding elongation factor signature 56 67 IPR000795 GO:0003924|GO:0005525
Car03g03075 340 Gene3D Translation factors 221 328 - -
Car03g03075 340 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 13 28 IPR031157 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03075 Car-Chr3 75691257 75692577 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03075 1 336 Eukaryotic Initiation Factors Gene Family AT5G60390 80.769 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03075 K03231 - gmx:100801611 612.838