Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03074 ATGACAACTACAAAACAAATCACAGCGAAAAACCATCACAAGAAATGTAGCGGAAAATCACACGGCCCAGAATGGACGTCATCCACACGTGCGAGCCGCAAGATTGCGTTTATGTTGCGCTTATTCCGTTACCGGTTTTTCCCAATTCCAGACCAATCATCAGTTTATAGGACAGAAAAAGCTGATTCACTTGAAGACTCGAGAGCTATGCCTTCATCTTCACCTGTTCTTCCCACTCTTATGGAAAGCAAGTATTTGAAGCCCCCTGATTCTCTTCAGTGTTCACCGATCAGGGGTTTGACTGCAAATCCTGCCTCACTGCAAGCAACATCATCAAGTCCGATCAGAAGTGTTGGACCGGTGTTGTTGTCAAATGCTGAATGTCCTGGCAGCATCCCTTTTTCCTCTGTTTCGCAGCATGATAGGCGATATCAAGATTCTTCCTTTGCTTCTCAGACATTAGGTGACAGTACGTCTTCGGAAATCCATTCGACAACATTCACTTCCCTCCCTCAAGAAAATGGCGATATTTCCTGGGGACCAGATCCAATGGAGGACATTCTTAGTTTTCCTGAAATGTTTTCTGTCCAGCATGATCAGGTGGAAAACATTGCTGGCTACATGAATGACGACAATGCCAAAAAATCTGATTTCGGGGAGTGGGTTGAACAGCTAATGACAATTGATGATTCTCTTCATCCAAATTGGAATCAGCTTCTTGATGACGATGACAATGTTGCAGAACCAACACCAAAGGCAAATCAGGTTTCCCCGAAGCAGCAGCATATACCATCTGGAGAAGTCAACGGTCTTTGTAATTCTGCTTCAGCATCGACTGCACCTCAAACTAAGCCTAGAATGCGTTGGAGTCCTGAACTTCACGAGGCATTTGTGGAAGCAGTCAACCAGCTTGGTGGTAGTGAGAAGGCTACTCCAAAAGGTGTCTTAAATCTGATGAAAGTTGAGGGCCTTACTATTTACCATGTAAAAAGCCACCTGCAGAAGTATAGAACTGCCAGATACAAACCTGAGTCATCAGAAGAAGGAACTTCTGAGAAAAAAATGAATTCGATTGAAGACGTGAAATCTCTAGACTTGAAAACGAGTAAGGGAATCACTGAAGCACTACGGTTGCAGATGGAACTCCAAAAGCGGCTTCACGAACAACTTGAGATTCAAAGGAAGTTACAGATTCAAATTGAAACCCAAGGAAAACATCTTCAGATGATGTTTGAGAAACAGAAACAAATGGGTGACAACAAGGGCTCATTATCCCCTTCAAACGCGCCTTCTGCCACACTCTTGGACACGGGGCTACCTTCTTCTCCAGCAAACAATTCAAAAACTTCAAATGATGAAGGCGACAAATTAAGATGTAATACTGACATTTCAAAAGCCATACCTGAAGAAAGTTTTGAAAATGCAAGCAGAAACCTAATGGTAGATGAAGCTGAAGTTACAAATGAACATGAGAGGGTAGATGATCAGTTTTCTGCCATACCCCCCACGAAACGGGCGAAGATTCAATGA 1530 0.4327 MTTTKQITAKNHHKKCSGKSHGPEWTSSTRASRKIAFMLRLFRYRFFPIPDQSSVYRTEKADSLEDSRAMPSSSPVLPTLMESKYLKPPDSLQCSPIRGLTANPASLQATSSSPIRSVGPVLLSNAECPGSIPFSSVSQHDRRYQDSSFASQTLGDSTSSEIHSTTFTSLPQENGDISWGPDPMEDILSFPEMFSVQHDQVENIAGYMNDDNAKKSDFGEWVEQLMTIDDSLHPNWNQLLDDDDNVAEPTPKANQVSPKQQHIPSGEVNGLCNSASASTAPQTKPRMRWSPELHEAFVEAVNQLGGSEKATPKGVLNLMKVEGLTIYHVKSHLQKYRTARYKPESSEEGTSEKKMNSIEDVKSLDLKTSKGITEALRLQMELQKRLHEQLEIQRKLQIQIETQGKHLQMMFEKQKQMGDNKGSLSPSNAPSATLLDTGLPSSPANNSKTSNDEGDKLRCNTDISKAIPEESFENASRNLMVDEAEVTNEHERVDDQFSAIPPTKRAKIQ 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03074 509 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 284 338 IPR006447 GO:0003677
Car03g03074 509 Gene3D - 283 342 - -
Car03g03074 509 MobiDBLite consensus disorder prediction 483 498 - -
Car03g03074 509 MobiDBLite consensus disorder prediction 245 265 - -
Car03g03074 509 MobiDBLite consensus disorder prediction 145 177 - -
Car03g03074 509 MobiDBLite consensus disorder prediction 418 450 - -
Car03g03074 509 Coils Coil 373 393 - -
Car03g03074 509 MobiDBLite consensus disorder prediction 145 175 - -
Car03g03074 509 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 282 341 IPR017930 -
Car03g03074 509 MobiDBLite consensus disorder prediction 416 509 - -
Car03g03074 509 MobiDBLite consensus disorder prediction 1 27 - -
Car03g03074 509 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 71 509 IPR044848 GO:0003700
Car03g03074 509 MobiDBLite consensus disorder prediction 250 265 - -
Car03g03074 509 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 71 509 - -
Car03g03074 509 Pfam MYB-CC type transfactor, LHEQLE motif 372 417 IPR025756 -
Car03g03074 509 Pfam Myb-like DNA-binding domain 286 337 IPR001005 -
Car03g03074 509 SUPERFAMILY Homeodomain-like 282 338 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03074 Car-Chr3 75683107 75688456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03074 174 429 G2-like Transcription Factor Family AT4G28610 53.933 4.19e-76 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car03g03074 Myb_DNA-binding 4.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03074 - - mtr:MTR_7g115530 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03074 03 75683107 75688456 Car04g00446 04 4584530 4597664 ECH
Car03g03074 03 75683107 75688456 Car03g03074 03 75683107 75688456 ECH