Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03070 ATGCAATCCCTCAAGTTACGTTCTCTTCTTTTTTATTCTCCTTTCAATTACTCACTTCATCCCTTTCTCTTTTCATTTTCTACTGCTTCTTTATCAACCCCAAATCAAACCACTATTCTCCACGATTTCCTCAATTCCAATTTCAATTTCCCCAAATCTCAATCCCTTTATATCTCTAAACGCATTTCATCTGACACCCTCCCTCTAAAGCCCTTATCCGTCCTCAACTTTTTCAAACAAATTGGATTATCCGAATCTCAGATTCACTCTATTATTCGTCAGAGAGCTCAAATACTCTTCTCAGATGTTGATAAAACTCTAAAACCTAAAATTCACCTCTTTCAACAATTGGGTTTCCAATGTTCGGATTTATGCGATTTCATTTCCAAACATCCCACCATTTTGACTGCTAGTTTGAACAAAACATTGGTACCCTCCGTCGAAGCCATTCGAAAAATTGTTGGCAACGAAAAAGATCTTATTCATGTTTTGTGCAAATGTGGTAGGATACTCCCAAAGTACCAACTTTTTGTCGCCAACGCCGCTTTCCTAGAGAGATGGGGAATTTTTGGTGATCAGCTTTTGATTCTACTCAAACGACAGTCGAGACTTTTGACTGCCACACAATCTTCTATTAGGAACTATGTTTTGCAAGCTGTAGACTTGGgtttcgaagaaaattcaagaatgttggttcacgcgcttcataccttatctggtttgaatcctaaaacatttaggagaaagatggATTTTATTCAGGGTTTCGGGTTTTCTAAAGATGAGTGCTTGCAAATGTTTAAAAAGGCTCCAGCTTTGCTTAGGACTTCGGAGAAGAAATTAAAGGTTGGAATGGAATTCTTCTTGAAGACAGTAATGCTGCCAAAGTCAGCGTTGGTTCAACGGCCTGTGATTTTGATGTATAGCATCGAGGATCGAGTGTTTCCTCGGTATAGAGTTTTTCAGCTTTTGAAAGCACAAAATCTATGTAGGAAGGTTCCAAGCTTTATTCATGTGTTATATACATATTTTGATGGAAATATAGTCGGGTTGCAAGGTCAATTGTCAGGCTCATCCTCTGTGGACCCATTAACAAGTTCAGTTGCAGATTTGAATACCGAAGAACTGTGTATTGTGCATGGTGATGGCTTTTCTGGAGCTTCTGAAATAGTAGTTATTAATTCAGTTTTCTTGGATCATGAAGTTGGTGATGGAGATGGTAATCCGGAGGAAAAGAAGGGATCTGAGTTCCTTACTCTGCTGTCCCAAAACGAACTTCCTCTAGAAGTAAACTTGTCTATAATCACAAACGAGGCTCAGGAAGAATCTGCACATGCGGTACAGTTCACGACTTGTAGAGATGTCGAGGTTTTGCAGGAAAAGGAAGACATGAATGTTAATATTCATCCACTTCATGTGCTTGATGACACACTTGATGTAGCTTATCCTCAGAGCGAGTCATTGAAACGCGAGGAAGATGTTACCAAGGAAGATAATTTTCATTTCAACAGAAGCCAATTGAGCGATAAAAGCAGTGTCCTTTCTTCAGATATGCATGTTATAGAAAATTCTCAACCTGAAGATGGAAGGCATGTTGGAGCTAATGTGGAAAATGACACTGAAATTATATTGAAAGATTTTCAACCTAGTGACCTCTTTCAATCAGAAGTAGAGCAATCAAATGACttatttaagaataatagtgatgatgctactgaaacgggtaaaattgaacgtgatataaccgatgctcaaTGTAAAGAAATGCCTAAGTCTGAGAGCAGTCATTTTGAAAGCCCGATGATTTCAGATGTTGTAGTTGATGGGCCTGCAAGAAAGTCCAATGGCACAGATATAGATCCAGGTGGAGAGCCTGGTGGAGAAGTGTCTAGAATTACTGCTGTGCCACTGCCTTTTGAAGATCAAAGCGTTAATAACTTGGTTAAACCAACTTCACTCGGAAATGACGCTTCAGTTGAGTCTGGTAGCCGCCGGCGTGACAGTTTGGACGGCAACTGGGGATCTGGTTCAGTTTTCCGACGCTATCTGATGAACCAGCTGTTATTGATGCCAAAACTTTACAATCCACCGGATCGCTGGCTTCAACAGAAGCAGGTAAATCAAACTCGAACCTCCCACAGGCTGCACTTGCTGATAGACAGCTGTCTGGAAAATCAGAAACGTTTGAGCTGCCGTCTTTCACGACATTGGTTGAATCTATCCATATGGCTACTAGTCCTAAAGGTGCCGGTGCTTCTGAATTCCATAACCCGCAACAGTCAAATTCGACTTCACAAGCCGCCTCAAGGGAGAAAGAAGAACGAAGAAATAACTTCCAAGGTAACAAACTGGAGCAGCGGTAAAGAGCACACACCTCTGAAGAGTCTCTTAGGTGAGGCCATTAGTAGCAACAATCCGAAATCACTGAAAATGGAAGAAAATAATGGTTCTGGATTGACAACTGTTAACTCGATTCTCGGTCCCGAGTCACCTTCAGGTCAAGTGATGAAAGGAGAGGCTGCAAATGAGTAG 2532 0.3867 MQSLKLRSLLFYSPFNYSLHPFLFSFSTASLSTPNQTTILHDFLNSNFNFPKSQSLYISKRISSDTLPLKPLSVLNFFKQIGLSESQIHSIIRQRAQILFSDVDKTLKPKIHLFQQLGFQCSDLCDFISKHPTILTASLNKTLVPSVEAIRKIVGNEKDLIHVLCKCGRILPKYQLFVANAAFLERWGIFGDQLLILLKRQSRLLTATQSSIRNYVLQAVDLGFEENSRMLVHALHTLSGLNPKTFRRKMDFIQGFGFSKDECLQMFKKAPALLRTSEKKLKVGMEFFLKTVMLPKSALVQRPVILMYSIEDRVFPRYRVFQLLKAQNLCRKVPSFIHVLYTYFDGNIVGLQGQLSGSSSVDPLTSSVADLNTEELCIVHGDGFSGASEIVVINSVFLDHEVGDGDGNPEEKKGSEFLTLLSQNELPLEVNLSIITNEAQEESAHAVQFTTCRDVEVLQEKEDMNVNIHPLHVLDDTLDVAYPQSESLKREEDVTKEDNFHFNRSQLSDKSSVLSSDMHVIENSQPEDGRHVGANVENDTEIILKDFQPSDLFQSEVEQSNDLFKNNSDDATETGKIERDITDAQCKEMPKSESSHFESPMISDVVVDGPARKSNGTDIDPGGEPGGEVSRITAVPLPFEDQSVNNLVKPTSLGNDASVESGSRRRDSLDGNWGSGSVFRRYLMNQLLLMPKLYNPPDRWLQQKQVNQTRTSHRLHLLIDSCLENQKRLSCRLSRHWLNLSIWLLVLKVPVLLNSITRNSQIRLHKPPQGRKKNEEITSKVTNWSSGKEHTPLKSLLGEAISSNNPKSLKMEENNGSGLTTVNSILGPESPSGQVMKGEAANE 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03070 843 Pfam mTERF 250 340 IPR003690 GO:0003690|GO:0006355
Car03g03070 843 Pfam mTERF 75 167 IPR003690 GO:0003690|GO:0006355
Car03g03070 843 MobiDBLite consensus disorder prediction 765 843 - -
Car03g03070 843 MobiDBLite consensus disorder prediction 646 670 - -
Car03g03070 843 PANTHER EMB|CAB62602.1 28 341 - -
Car03g03070 843 SMART mt_12 125 156 IPR003690 GO:0003690|GO:0006355
Car03g03070 843 SMART mt_12 89 120 IPR003690 GO:0003690|GO:0006355
Car03g03070 843 SMART mt_12 296 327 IPR003690 GO:0003690|GO:0006355
Car03g03070 843 SMART mt_12 229 259 IPR003690 GO:0003690|GO:0006355
Car03g03070 843 SMART mt_12 264 295 IPR003690 GO:0003690|GO:0006355
Car03g03070 843 PANTHER CGI-12 PROTEIN-RELATED 28 341 IPR003690 GO:0003690|GO:0006355
Car03g03070 843 MobiDBLite consensus disorder prediction 797 830 - -
Car03g03070 843 Gene3D Transcription termination factor 3, mitochondrial 174 345 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03070 Car-Chr3 75648642 75653037 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car03g03070 mTERF 1.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03070 K15032 - jre:108985778 281.567