Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03068 ATGGGGACTCCTGTGAATATTATTGTGGGTTCTCATGTCTGGGTTGAAGATCCAGATGTATCTTGGATTGATGGACAGGTTTCTAAAATCACTGGTCAGGATGCAGAAATTGAAACGACCAATGGAAAGAAGGTTGTTGCAAAGTTATCAAAAATATTACCCAAAGATATGGAAGCTCCCGCTGGTGGAGTGGATGATATGACTAAATTGTCCTATTTGCATGAGCCTGGTGTCCTGGAGAACTTAAAAATTAGATATGAATTGAATGAAATATACACTTATACTGGAAACATACTGATTGCAATAAATCCATTTCAAAAACTACCTCATCTTTATGATTTACATATGATGCAACAATACAAAGGAGCACCATTTGGAGAGTTAAGCCCTCATGTATTTGCAGTTGCTGATGTTGCGTACAGGGCAATGGTTAATGAACGGAAAAGCAATTCAATTCTGGTCAGTGGTGAAAGTGGAGCTGGTAAAACTGAAACTACGAAAATGCTTATGCAGTACCTTGCTTTCTTAGGTGGTAGGGCAGCCACTGAAGGACGAACAGTTGAACAACAAGTTCTTGAATCAAATCCAGTTTTGGAAGCATTTGGTAATGCTAAGACCGTCAGGAATAACAATTCCAGGCAAGTCTTCTTTACATGTGAGCATCGTTTTGGTAAGTTTGTCGAgatccaatttgataagagtggaagaatctcaggagcagccattcggacataccttcttgagagatctcgggtttgccaagttaatgatccggaacgcaactaccactgcttttatcttctttgtgctgcaccacaggagGAACTTGACAAATACAAATTAGGACATCCTAAAACATTTCATTACCTTAACCAGTCAAAATGCTACGAACTGGCTGATATAAGTGATGCTCGTGAGTATCTTGCCACTAGGAGAGCTATGGATATTGTTGGAATAAGCCAAAAAGAGCAGGAAGCAATTTTCAGAGTTGTTGCTTCAATTCTTCATATTGGTAATATTGATTTCGCCAAAGGAAAGGAAGTTGATTCATCGGTCCCAAAAGATGATAAGGCCAGATTCCACTTAAAAACAACTGCTGAGCTCCTCATGTGTGATGTTGATGCCTTAGAAGATGCATTATGTAAGCGTGTCATGGTCACCCCTGAGGAAATTATAAAACGGAGTCTTGATCCGCAAAGTGCAGCAATCAGCAGAGATGGCTTCGCGAAAACAATTTATTCTAGGCTGTTTGACTGGTTGGTGGACAAGATTAATAATTCAATTGGACAAGATGCCAATTCTAAATCTTTGATCGGGGTCCTTGATATCTATGGTTTTGAAAGCTTTAAATCTAACAGTTTTGAGCAGTTCTGCATTAATTTTACAAATGAGAAGTTGCAGCAGCATTTCAATCAGCACGTGTTCAAAATGGAACAAGAGGAATATACAAAGGAACAGATCGATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATCGAAAAGAAACCTGGAGGAATCATCGCTCTCCTTGATGAAGCTTGCATGTTTCCAAAGTCAACACATGAAACATTTTCAAACAAGCTTTATCAGACATTTAAGAGTCACAAGCGCTTTGTTAAACCAAAATTGTCTCGAACAGATTTCACTATTGCTCATTATGCGGGCGAGGTGCAGTACCAGTCTGACCAATTTTTAGATAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTATTGAGTTCTTCCAAATGTCCTTTTGTAGCGGGTCTTTTTCCTCCACTTCCAGAAGAGACATCGAAATCTTCAAAGTTTTCTTCTATCGGTTCTCGTTTTAAGCTGCAATTACAACAATTAATGGAGACATTAAACTCAACAGAGCCTCATTACGTTAGATGTGTGAAACCAAACAACCTCCTCAAGCCTGCAGTTTTTGAGAATGTCAATATTATGCAACAACTTCGCTGTGGTGGTGTTTTAGAGGCAATCAGGATAAGTTGTGCTGGGTACCCAACTCGCCGTGCTTTCTTTGAGTTTATAAACCGATTTTCCCTCCTTGCCCCAGAGGTCACAGAAGCACACAATGATGAGAAGGCCGTTTGCCACAAGATTCTAGAAAAGATGGAGCTTAAAGGATATCAGATTGGAAAAACAAAGGTATTTCTAAGAGCAGGTCAGATGGCTGAACTAGATGCTCGGAGAGCTCAAGTACTAAGTATAGCAGCAAAAACTATCCAACGGCGTATACGAACCCATCAGGCCCGTAAACATTATCTTGCATTACGAAAGAAAACCATATATGTGCAGTCTCTGTGGAGAGGAAGACTTGCATGTAAACTTTATCAACACATGAGAAGGGATGCTGCTGCTGTGAAAATTCAGAAGCACGCACGCAGACATTCATCTTGGAAATCCTACATTAAACTCCATGCATCAGTGCTTACTTTGCAAACAGCTTTGAGGGCAATCGCTGCCCGTAAGGAGTTCAATTTTAGGAAACGGACTAAAGCTTCCATCACAATTCAGGCTCGCTGGCGGTGCTACAGGGCTTCCTCATATTATAAGAGGTTGAAGAAAGGTTCAATTCTGACACAATGCCGATGGAGAGGGCGTGTAGCCAGAAAAGAACTTAGGAACCTGAAAATGGCTGCAAGAGAAACTGGCGCACTTAAAGAGGCAAAGGATAAGCTTGAAAAACGAGTGGAGGAACTCACATGGCGCCTCCAACTAGAAAAAAGTTTAAGGACCAATCTAGAAGAATCCAAAGCACAAGAGATAGCAAAACTGCAGAACTCCCTGCAGGAGCTGCAGAGCAAAGCTGATGAAACCAATGCCATGCTTGTAAAGGAGCGAGAGAATGCAAAGAAATCTATAGAAGAAGCACCTCCTGTTATTCAAGAGACTCAGGTTATCGTTGAAGACACACAGAAGATTGAATCTCTAACAGCAGAAGTTGAGAGTTTAAAGACATCACTAGAGTCAGAGAAACAGAAAGCTGGTGATTTGGAAAAGAAATATAATGAAGCCCAAGCTTATAGTGAAGAAAGGAGTAAAAAGTTAGAAGACACAGAAAAGAAGGCCCGTCAGCTCCAAGAATCATTGACCAGGCTAGAAGAGAAGATTACAAATTTAGAATCAGAGAATCAAGTTCTACGTCAACAAGCTGTTTCCATGGCACCTAATAAGTTCCTCTCAGGACGCTCCAGATCAATTATCCAGAGAGTTGACAGTGGACATATTGGAGTAGAAGCAAAACCACATCTGGATATGCAAAGTCCATCAATGAACCAcagggaatccagagaatccagggaatccagggaatccaATGAGGTGGAGGATAAACCACAGAAGTCACTGAATGAGAAACAACAGGAGAAccaagagttgctcattagatgtattgcacagcatctaggctttgctgggaatagaccaattgctgcctgtatcatatacaaatgcctcttgcattggagatcatttgaagttgagcgtaccagtgtgtttgatcgtattatccaaactataggccatgcaattgagACCCAGGAAAACAATGATGTCTTGGCTTATTGGTTATCCAATGCTTCTACACTTCTCTTGTTGCTTCAGCGCACACTTAAGGCGAGTGGTGCTGCTGGAATGGCTCCTCAACGCCGCCGTTCTTCCTCGGCAACCCTGTTTGGGAGGATGACACAAGTAAATATAACTTCTGATTTGAACGGATTAATTCCCATTGAGAAATTTTCCTTCTTCAGGCAAGTATATATTTTCATTTACCTTGTTACAGACATGAACGGAGGAGTAGATACACTAAGACAGGTTGAGGCCAAGTACCCAGCTCTGCTTTTCAAACAGCAGCTTACAGCATATGTAGAAAAAATATATGGAATGATTCGAGATAACTTGAAGAAAGAAATTTCTCCCTTGCTTGGATTATGCATCCAGGCACCAAGAACATCCAGGGCAAGCTTAGTTAAGGGATCATCACGTTCAGTTGCAAACACTGAAGCGCAAAAAGCCTTGATTGCTCACTGGCAGGGGATAGTCAAGAGCCTTGGGATCTTCTTAAATACTTTGAAAGCAAATCACGTTCCCCCATTTTTGGTTCGTAAGGTGTTCACTCAAATTTTTTCTTTCATCAATGTCCAACTCTTCAATAGTCTTCTCTTAAGACGGGAGTGCTGTTCATTTAGCAATGGAGAATATGTGAAAGCTGGTTTGGCTGAATTGGAGCATTGGTGTTATAAGGCAACTGATGAGTATGCAGGTCCAGCCTGGGATGAGCTCAAACATATTAGGCAAGCTATTGGATTTCTGGTCATACATCAGAAACCAAAGAAAACGTTGGATGAAATAAGTCATGACCTTTGTCCAGTCCTCAGTATACAGCAGCTATATCGAATTAGCACCATGTACTGGGATGACAAGTATGGCACACATAGTGTGTCCCCTGATGTCATATCAAATATGCGAGTGTTGATGACTGAAGATTCAAATAATGCAGTTAGTAATTCTTTTCTGTTGGATGATGATTCAAGCATTCCATTTTCTGTTGATGACATATCAAAGTCAAATGAACAGATAGATATCTCTGATATAGAGCCTCCACCACTAATTCGTGAGAACTCTGGCTTTAGTTTCTTGTTGCCACGCCCAGACTGA 4683 0.3765 MGTPVNIIVGSHVWVEDPDVSWIDGQVSKITGQDAEIETTNGKKVVAKLSKILPKDMEAPAGGVDDMTKLSYLHEPGVLENLKIRYELNEIYTYTGNILIAINPFQKLPHLYDLHMMQQYKGAPFGELSPHVFAVADVAYRAMVNERKSNSILVSGESGAGKTETTKMLMQYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSRQVFFTCEHRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQVNDPERNYHCFYLLCAAPQEELDKYKLGHPKTFHYLNQSKCYELADISDAREYLATRRAMDIVGISQKEQEAIFRVVASILHIGNIDFAKGKEVDSSVPKDDKARFHLKTTAELLMCDVDALEDALCKRVMVTPEEIIKRSLDPQSAAISRDGFAKTIYSRLFDWLVDKINNSIGQDANSKSLIGVLDIYGFESFKSNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSNKLYQTFKSHKRFVKPKLSRTDFTIAHYAGEVQYQSDQFLDKNKDYVVPEHQDLLSSSKCPFVAGLFPPLPEETSKSSKFSSIGSRFKLQLQQLMETLNSTEPHYVRCVKPNNLLKPAVFENVNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFSLLAPEVTEAHNDEKAVCHKILEKMELKGYQIGKTKVFLRAGQMAELDARRAQVLSIAAKTIQRRIRTHQARKHYLALRKKTIYVQSLWRGRLACKLYQHMRRDAAAVKIQKHARRHSSWKSYIKLHASVLTLQTALRAIAARKEFNFRKRTKASITIQARWRCYRASSYYKRLKKGSILTQCRWRGRVARKELRNLKMAARETGALKEAKDKLEKRVEELTWRLQLEKSLRTNLEESKAQEIAKLQNSLQELQSKADETNAMLVKERENAKKSIEEAPPVIQETQVIVEDTQKIESLTAEVESLKTSLESEKQKAGDLEKKYNEAQAYSEERSKKLEDTEKKARQLQESLTRLEEKITNLESENQVLRQQAVSMAPNKFLSGRSRSIIQRVDSGHIGVEAKPHLDMQSPSMNHRESRESRESRESNEVEDKPQKSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQENNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQVNITSDLNGLIPIEKFSFFRQVYIFIYLVTDMNGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQKALIAHWQGIVKSLGIFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGPAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSNEQIDISDIEPPPLIRENSGFSFLLPRPD 1560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03068 1560 Pfam DIL domain 1379 1482 IPR002710 -
Car03g03068 1560 SMART iq_5 813 835 IPR000048 GO:0005515
Car03g03068 1560 SMART iq_5 790 812 IPR000048 GO:0005515
Car03g03068 1560 SMART iq_5 861 883 IPR000048 GO:0005515
Car03g03068 1560 SMART iq_5 765 787 IPR000048 GO:0005515
Car03g03068 1560 SMART iq_5 838 860 IPR000048 GO:0005515
Car03g03068 1560 SMART iq_5 742 764 IPR000048 GO:0005515
Car03g03068 1560 ProSiteProfiles IQ motif profile. 862 891 IPR000048 GO:0005515
Car03g03068 1560 Coils Coil 924 958 - -
Car03g03068 1560 ProSiteProfiles IQ motif profile. 814 843 IPR000048 GO:0005515
Car03g03068 1560 ProSiteProfiles IQ motif profile. 743 770 IPR000048 GO:0005515
Car03g03068 1560 Gene3D - 260 318 - -
Car03g03068 1560 MobiDBLite consensus disorder prediction 1087 1128 - -
Car03g03068 1560 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car03g03068 1560 PRINTS Myosin heavy chain signature 437 465 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car03g03068 1560 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car03g03068 1560 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car03g03068 1560 PRINTS Myosin heavy chain signature 490 518 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car03g03068 1560 SMART DIL_2 1378 1485 IPR002710 -
Car03g03068 1560 Pfam IQ calmodulin-binding motif 840 860 IPR000048 GO:0005515
Car03g03068 1560 Pfam IQ calmodulin-binding motif 746 763 IPR000048 GO:0005515
Car03g03068 1560 Pfam IQ calmodulin-binding motif 866 883 IPR000048 GO:0005515
Car03g03068 1560 Pfam Myosin N-terminal SH3-like domain 9 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car03g03068 1560 SMART MYSc_2a 57 741 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car03g03068 1560 Gene3D - 447 631 - -
Car03g03068 1560 PANTHER MYOSIN 6 1557 - -
Car03g03068 1560 Gene3D Kinesin motor domain 65 670 IPR036961 -
Car03g03068 1560 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car03g03068 1560 Gene3D Myosin VI head, motor domain, U50 subdomain 320 609 - -
Car03g03068 1560 CDD MyosinXI_CBD 1127 1526 IPR037975 GO:0007015
Car03g03068 1560 ProSiteProfiles Myosin motor domain profile. 62 740 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car03g03068 1560 Coils Coil 976 1059 - -
Car03g03068 1560 PANTHER MYOSIN-9 6 1557 - -
Car03g03068 1560 Coils Coil 885 919 - -
Car03g03068 1560 MobiDBLite consensus disorder prediction 1097 1127 - -
Car03g03068 1560 ProSiteProfiles Dilute domain profile. 1176 1503 IPR002710 -
Car03g03068 1560 Pfam Myosin head (motor domain) 64 728 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car03g03068 1560 CDD MYSc_Myo11 76 728 IPR036018 -
Car03g03068 1560 ProSiteProfiles IQ motif profile. 766 795 IPR000048 GO:0005515
Car03g03068 1560 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 793 891 IPR027417 -
Car03g03068 1560 ProSiteProfiles IQ motif profile. 839 866 IPR000048 GO:0005515
Car03g03068 1560 Gene3D - 675 741 - -
Car03g03068 1560 MobiDBLite consensus disorder prediction 999 1029 - -
Car03g03068 1560 Gene3D - 794 840 - -
Car03g03068 1560 Gene3D - 743 793 - -
Car03g03068 1560 Gene3D - 841 890 - -
Car03g03068 1560 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 792 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03068 Car-Chr3 75615265 75627443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03068 1 1560 Myosins gene family AT1G54560 81.742 0.0 2662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03068 K10357 - gmx:100816792 2669.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03068 03 75615265 75627443 Car03g03068 03 75615265 75627443 ECH
Car03g03068 03 75615265 75627443 Car04g00059 04 617505 637333 PCT