Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03053 ATGAATAGAAGTGATTCAGAATGGGCTTTTCAACAGTTTCTAAAAGAATATGCAAATACATCTAACTCAAAGCCTGGTTcttcatcatcaacttcaacttcaacttcttcttcaaacttTGATGTTGATGTCAAACTCAAAATAaataataataataataataataataataataataatTCAGAGGATCGCTATGCTCTTCTCAAAGCCAAGCTAGATCTCGCTTGCGCCGCTGTAGCTATGACTCGGAGATCTATGGGAAAATCTAAATCTCAGGAACCTGACAATGGATCACAAGCATCTTATCCTTCTCAAGTTGCACCTCAGGCTACTTCCAAAGATTCTGGCCCTTGTGGAAATAATCCATCTACAACATTACAAAATAAAGATGTGAAAATGCAAGTTGTTGAAATAAGATCAACAACAAGTGGATCATCAAAAGAACATTCAGATGATGAGGATGCTGAGGGAGAGATTAATATGAATGGAGGAAACATCAACCGTGCTGATGCAAAAAGAGTTAGGAGGATGCTCTCTAATAGAGAGTCTGCTAGACGCTCTAGAAGAAGAAAGCAAGCTCATTTAACTGACCTTGAAACACAGGTCTCTCAATTAAGAGGTGAAAATGGTTCATTGTTAAAGCGTTTAACTGATATTACACATAAGTACAATGATGCTGCTGTTGACAACAGAGTTTTGAAAGCTGATGTTCAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAGACAGTTAAAAGATTTACTGGTTTGAATCCAATGTTCAATGCAATGTCTGAGATATCATCAATGGGAATGTCATTATTTAATGGAAGTCCTTCTGAGTCATCAGCTGATGCATCTGTGCCTGTGCAAGAAGATCCAAATAATCACTTTTGTCAACCAACTTCTAATAATGTTATATCCAAACATGATAATAGAGGAGTCAATAATGGTTTAGGAGCTGGCATTATTTCTTCAGCTGAAAATGTGCAGAAGAACACTGCAGGTGGAAATAAGATAGGACGAACAAATTCGCTGACGCGGGTGGCTAGCTTGGAACATCTTCAGAATCGGATTCGCGGTGGAGCCGGTTCGTGTGGACCTTCTAAAGAAGACAAGTAA 1122 0.3654 MNRSDSEWAFQQFLKEYANTSNSKPGSSSSTSTSTSSSNFDVDVKLKINNNNNNNNNNNNSEDRYALLKAKLDLACAAVAMTRRSMGKSKSQEPDNGSQASYPSQVAPQATSKDSGPCGNNPSTTLQNKDVKMQVVEIRSTTSGSSKEHSDDEDAEGEINMNGGNINRADAKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENGSLLKRLTDITHKYNDAAVDNRVLKADVQTLRAKVKMAEETVKRFTGLNPMFNAMSEISSMGMSLFNGSPSESSADASVPVQEDPNNHFCQPTSNNVISKHDNRGVNNGLGAGIISSAENVQKNTAGGNKIGRTNSLTRVASLEHLQNRIRGGAGSCGPSKEDK 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03053 373 Coils Coil 230 250 - -
Car03g03053 373 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 170 224 IPR004827 GO:0003700|GO:0006355
Car03g03053 373 MobiDBLite consensus disorder prediction 19 39 - -
Car03g03053 373 SUPERFAMILY Leucine zipper domain 172 222 IPR046347 GO:0003700|GO:0006355
Car03g03053 373 MobiDBLite consensus disorder prediction 85 169 - -
Car03g03053 373 Coils Coil 188 215 - -
Car03g03053 373 PANTHER BASIC LEUCINE ZIPPER 63 1 370 - -
Car03g03053 373 PANTHER BASIC LEUCINE ZIPPER 63 1 370 - -
Car03g03053 373 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 175 190 IPR004827 GO:0003700|GO:0006355
Car03g03053 373 MobiDBLite consensus disorder prediction 85 143 - -
Car03g03053 373 Gene3D - 171 225 - -
Car03g03053 373 Pfam bZIP transcription factor 170 223 IPR004827 GO:0003700|GO:0006355
Car03g03053 373 SMART brlzneu 168 232 IPR004827 GO:0003700|GO:0006355
Car03g03053 373 Pfam Basic leucine-zipper C terminal 239 363 IPR020983 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03053 Car-Chr3 75493875 75497303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03053 1 261 bZIP Transcription Factor Family AT4G02640 42.199 7.03e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car03g03053 bZIP_C 3.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03053 K25784 - gmx:778137 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03053 03 75493875 75497303 Car03g03053 03 75493875 75497303 ECH
Car03g03053 03 75493875 75497303 Car04g00473 04 4857165 4861420 PCT