Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03050 ATGGAGCTACCTTCGAATCTGCTGGCGGATGAGTCAAGCCCGGAATGGATGAACAAAGGGGACAACGCATGGCAGTTAACAGCAGCAACAATGGTTGGGCTTCAAAGCATTCCTGGGCTTGTCATTCTATACGGAAGCCTTGTAAAGAAAACATGGGCCATTAACTCTGCTTTCATGGCCTTTTATGCTTTTGCGGCCGTTCTCCTTTGTTGGGTTTCATGGGCCTTCCACATGTCATTCGGGGATAAAATGGTATTTTTCTTGGGAAAACCAGGGGTAGCATTGGACGAAAAGTTTTTATTGGGGAAAGCTTTTTTAGGGAATTTTCCCAATGCTACAATGGTATTTTATCAAGGTGTGTTTGCTGGGATTACTTTGATTTTAATAGCGGGTGCTTTACTTGGGAGAATGAATATTAAGGCGTGGATGCTATTTGTGCCACTTTGGGTAACATTTTCATATAGTGTAACTGCTTTTAGTATTTGGTGCCCTGATGGGTGGTTAGCGAAACGCGGTGTTATTGATTTTGCTGGGGGGTATGTTATTCACCTCTCTGCTGGAGTTGCTGGTTTCACTGCAGCTTATTGGGTGGGTCCTCGATCAGAGAAGGACAGAGAAATATTTCCGGAAGCAGCAAACAACATGATAATGATGCTTGCGGGCGCAggattgctttggatgggttggagtggattCAACGGTGGAGGTCCATTTATGGCTAGTACAATTGCATCTCTTGCTATTCTAAACACACACGTGTGTACTGCTGCTAGCATCATCGTATGGGTCCTACTTGATACCTTCTATTTCGGCAAGCCTACCGTGTTTGGCGCTGTTCAGGGCATGATCACCGGACTCGTTTGCATCACACCTGCCGCAGGAGTTGTGCAAGGATGGGCAGCAATGTTGATGGGTTTGATCTCAGGAAGTATTCCATGGTACACAATGATGGTACTTCATAACAAGATTAATTTCTTAAACAAAATTGACGACCCCATGTCGGTATTCCACACCCATGCCGTAGCCGGTGCTCTCGGCGGCATTCTCACCGGCTTCTTTGCCGTGCCTAAACTTTGTCGTCTTTTCTACATGGTGCCCAATTGGGAAAATTACGTTGGCCTCGCTTATGGCCTACAAAATAAAGGTGCAACTCGTGCGGGTTTGAAACAAATGGCGGTCCAAATTGAGGCTATAGTTTTTGTGATTTGCTTCAACGTTCTTATGACTAGTTTGATTTGTCTAGTTGTGGGGGTTATGGTACCACTTAGGATTAACAATGATGTGTTGCTAATGGGTGACAAGGCAATACATGGAGAAGACGCTTTTGCCATGAATAGTGAGACTGCTAAATTTGTGAACGTTAAGCGCAATAAGATTTATGATACTCAAGATTTTTCATCGATTCACGAGTCTAGATCATTAGACGAGCTTCAAATGGTATGA 1443 0.4338 MELPSNLLADESSPEWMNKGDNAWQLTAATMVGLQSIPGLVILYGSLVKKTWAINSAFMAFYAFAAVLLCWVSWAFHMSFGDKMVFFLGKPGVALDEKFLLGKAFLGNFPNATMVFYQGVFAGITLILIAGALLGRMNIKAWMLFVPLWVTFSYSVTAFSIWCPDGWLAKRGVIDFAGGYVIHLSAGVAGFTAAYWVGPRSEKDREIFPEAANNMIMMLAGAGLLWMGWSGFNGGGPFMASTIASLAILNTHVCTAASIIVWVLLDTFYFGKPTVFGAVQGMITGLVCITPAAGVVQGWAAMLMGLISGSIPWYTMMVLHNKINFLNKIDDPMSVFHTHAVAGALGGILTGFFAVPKLCRLFYMVPNWENYVGLAYGLQNKGATRAGLKQMAVQIEAIVFVICFNVLMTSLICLVVGVMVPLRINNDVLLMGDKAIHGEDAFAMNSETAKFVNVKRNKIYDTQDFSSIHESRSLDELQMV 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03050 480 ProSitePatterns Ammonium transporters signature. 175 200 IPR018047 GO:0008519|GO:0016020|GO:0072488
Car03g03050 480 PANTHER AMMONIUM TRANSPORTER 1 480 - -
Car03g03050 480 Gene3D Ammonium transporter AmtB like domains 5 460 IPR029020 -
Car03g03050 480 PRINTS Rhesus blood group protein signature 118 134 IPR002229 GO:0005887
Car03g03050 480 PRINTS Rhesus blood group protein signature 216 234 IPR002229 GO:0005887
Car03g03050 480 PRINTS Rhesus blood group protein signature 247 269 IPR002229 GO:0005887
Car03g03050 480 PRINTS Rhesus blood group protein signature 302 320 IPR002229 GO:0005887
Car03g03050 480 PANTHER AMMONIUM TRANSPORTER MEP2 1 480 IPR001905 GO:0008519|GO:0016020|GO:0072488
Car03g03050 480 Pfam Ammonium Transporter Family 23 441 IPR024041 GO:0008519|GO:0016020|GO:0072488
Car03g03050 480 SUPERFAMILY Ammonium transporter 16 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03050 Car-Chr3 75464841 75466534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03050 112 471 Inorganic Solute Cotransporters AT2G38290 51.667 2.13e-119 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03050 K03320 - gmx:100782944 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03050 03 75464841 75466534 Car03g03050 03 75464841 75466534 ECH