Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03036 ATGAATGATGTAACACAGCTTGAAACAGATTACTCTGACTTTGTTGAACTTGATCCAACCGGTAGATATGGCAGATACAATGAAATTCTCGGCAAAGGAGCTTCTAAGATAGTATATAGAGCATTTGATGAGTATGAAGGGATTGAAGTTGCTTGGAATCAAGTCAAACTTTATGATTTCCTACAAAGTCCTGAAGATCTAGAAAGGCTTTACTGTGAAATTCATCTCCTCAAGACTTTGAAGCATAGAAATATTATGAAATTTTACACTTCTTGGGTTGATACTGCAAATCGAAACATCAATTTTGTTACTGAATTGTTTACTTCTGGTACTCTTAGACAGTATAGGCTAAAGCATAAGAGAGTTAACATCAGAGCAGTGAAGCATTGGTGTAGACAGATCCTAGAAGGACTTCTATATCTTCATAGCCATGATCCACCTGTGATCCATAGAGATCTCAAATGTGATAATATTTTCATTAATGGAAATCAAGGGGAAGTGAAAATTGGGGATCTTGGCTTGGCAGCAATCCTCCGGAAATCGCATGCTGCTCATTGTGTAGGAACGCCCGAATTCATGGCACCAGAAGTATATGAAGAGGAATATAATGAATTAGTTGACATATATTCCTTTGGTATGTGTGTATTAGAAATGGTCACATTTGAGTATCCTTATAGCGAATGCAGCCATCCAGCACAAATCTACAAGAAAGTTTCTTCTGGTAAAAAACCGGATGCTTTGTATAAAGTAAAGGAACCAGAAGTGCGAGAATTTGTTGATAAATGCCTGGCAACAGCGTCTCTAAGGCTCTCTGCAAGGGAGCTTCTGGACGATCCTTTTCTTCGAATCGATGATTATGAATATGATTTGGGACCGACAGATGTTGGAGAGTTCGATGACTTGAGTCCTCTCTTTAGTCAGTCATTCTTTGCCCTCGATCGCAGCTATAGTAACATAAGTACTGAATACTCAAATGGTTTTGGGTGTGAAGTAGATTGGTATTCTCTTCCAGCTGAGGTTGAACATAGTGGAATTGAACTTTTTGAGTCCCATGACGATGAACACTCCAAAGATGTCGACATAAGCATCAAAGGCAAGAGGAAAGACGACGGTGGCATCTTTTTGAGACTAAGAATTGCAGACAAAGAAGGTCATATCCGAAACATTTATTTCCCGTTTGACATAGAGATGGACACAGCACTAAGCGTAGCAACTGAAATGGTTGCGGAACTCGACATTACCGATCAGGATGTTACTAGAATAGCTGGTATGATAGATGGCGAAATTGCTTCTTTGGTACCTGAATGGAGGCCAGGACCATTAATTGAAGAAACCGCTCACTCTGAAAATCAAAGATTCTGTTGTAATTGTGTGTCAAAACATACTTCTGGTGGAATAGTTATGGATTTTCTTTCACATAATCAAGGTAGAAAAAACCTGCAGCTTCTTGAATGCATCGGGCACGGATGTGCTTCAATGCACGGCCGGTTCGAGGAGGTTTCGTTCGAATCTGAGGAATATGACAACCATGTTAGAGAGGATGCACCTAACAACATGTCAAACCAATCAGACTTCTTGTTGCAGTATCAGGAATCGTGGAATCATCACGAAAGCCGCGAACTGAGTCCGGTTGAGTCCACTCAAAGCCATTCTGACGAACAATATGAACTACTATTAGATAAATCATCGTTGGCTGAAGAAAAAGGAGAGGGTGCATGGGAAAACAATTTTGCACTCAATGCAGGAAACTCAGAAAACTTATCAGTGAACGATTATTTCTCTACTACCGGTTCGCTATATAGTGACGTtgagaatgattatgagaaagagattcaacatgagctgagaTGGCTGAAGGCAAAATATCAAATGGAGTTAATGGAACTTAGGGATAAACAGTTGTGTCTAGCAGCTAAATCTCCAAATACTAGTGACAGAGAGCACGAAACACCGCCTGAAATGGTGAATGGGGTCGATAACGAGATTCACTCGAAACCCATTGGTAATTACAGAAATTATGATTCTCAAGAGCACAAGAGCCACCCGAATTTGGACACCCGAAGGGACCAAAGTTGCGCGGTGAAGTGTTCCGATGAAGAAGAAATTTCATCAAGAAACATCTCACAGGGCTGTTCCAAGCAGCAATGCAACCACAAATACTGTGCAGAACATGAATGCCAGAGATTTTGCTGTTTTCGTCCATGCTGGTTGTTTTCATGCAGAACTGACATGGTAGGGACTCGTCGCGTACGACGACAACTCCGGCGTTGTTTCCGTGTAATTGTGCCAAAAAGAAAAAATTGCAGCAGACCCATTGTTGGCTGA 2325 0.403 MNDVTQLETDYSDFVELDPTGRYGRYNEILGKGASKIVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTELFTSGTLRQYRLKHKRVNIRAVKHWCRQILEGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEEYNELVDIYSFGMCVLEMVTFEYPYSECSHPAQIYKKVSSGKKPDALYKVKEPEVREFVDKCLATASLRLSARELLDDPFLRIDDYEYDLGPTDVGEFDDLSPLFSQSFFALDRSYSNISTEYSNGFGCEVDWYSLPAEVEHSGIELFESHDDEHSKDVDISIKGKRKDDGGIFLRLRIADKEGHIRNIYFPFDIEMDTALSVATEMVAELDITDQDVTRIAGMIDGEIASLVPEWRPGPLIEETAHSENQRFCCNCVSKHTSGGIVMDFLSHNQGRKNLQLLECIGHGCASMHGRFEEVSFESEEYDNHVREDAPNNMSNQSDFLLQYQESWNHHESRELSPVESTQSHSDEQYELLLDKSSLAEEKGEGAWENNFALNAGNSENLSVNDYFSTTGSLYSDVENDYEKEIQHELRWLKAKYQMELMELRDKQLCLAAKSPNTSDREHETPPEMVNGVDNEIHSKPIGNYRNYDSQEHKSHPNLDTRRDQSCAVKCSDEEEISSRNISQGCSKQQCNHKYCAEHECQRFCCFRPCWLFSCRTDMVGTRRVRRQLRRCFRVIVPKRKNCSRPIVG 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03036 774 Gene3D - 371 451 - -
Car03g03036 774 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 701 - -
Car03g03036 774 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Car03g03036 774 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 1 701 - -
Car03g03036 774 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 374 427 IPR024678 GO:0004674|GO:0005524
Car03g03036 774 CDD STKc_WNK 22 281 - -
Car03g03036 774 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g03036 774 MobiDBLite consensus disorder prediction 640 659 - -
Car03g03036 774 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g03036 774 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Car03g03036 774 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g03036 774 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Car03g03036 774 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03036 Car-Chr3 75367724 75373056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03036 1 509 MAP Kinase Kinase Kinase AT3G22420 57.221 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Car03g03036 Pkinase 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03036 K08867 - gmx:100790554 1060.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03036 03 75367724 75373056 Car03g03036 03 75367724 75373056 ECH
Car03g03036 03 75367724 75373056 Car04g00486 04 4974848 4978658 PCT