Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03034 ATGGCAGACACTAAGGCAGTTACCATAAGGACTAGGAAGTTCATGACCAACAGACTCCTTTCCAGGAAGCAGTTCGTTGTTGAAGCCATTCATCCCGGTAGACCAAATGTTTCCAAGGCTGAGCTTAAGGAAAAGTTGGCAAAGTTGTACGACGTTAAGGACCCTAACACTGTTTTTGTCTTCAAATTCCGTACCCATTTTGGAGGTGGCAAATCAACCGGTTTTGGTTTGATTTACGATACAGTTGAGAATGCTAAGAAGTATGAGCCCAAATACAGACTTATCAGGAATGGTCTTGACACCAAAATAGAGAAGTCAAGGAAGCAAATGAAGGAGAGAAAGAATAGGGCCAAGAAGATCCGTGGTGTAAAGAAGACCAAGGCCTCTGATGCTGCCAAGGCTGGAAAAAAGAAATGA 417 0.4317 MADTKAVTIRTRKFMTNRLLSRKQFVVEAIHPGRPNVSKAELKEKLAKLYDVKDPNTVFVFKFRTHFGGGKSTGFGLIYDTVENAKKYEPKYRLIRNGLDTKIEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03034 138 MobiDBLite consensus disorder prediction 103 138 - -
Car03g03034 138 PANTHER 40S RIBOSOMAL PROTEIN S24 1 138 IPR001976 GO:0003735|GO:0005840|GO:0006412
Car03g03034 138 Pfam Ribosomal protein S24e 26 104 IPR001976 GO:0003735|GO:0005840|GO:0006412
Car03g03034 138 PANTHER 40S RIBOSOMAL PROTEIN S24 1 138 - -
Car03g03034 138 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 7 109 IPR012678 GO:0003735|GO:0005840|GO:0006412
Car03g03034 138 Hamap 30S ribosomal protein S24e [rps24e]. 5 107 IPR001976 GO:0003735|GO:0005840|GO:0006412
Car03g03034 138 ProSitePatterns Ribosomal protein S24e signature. 67 89 IPR018098 -
Car03g03034 138 Gene3D - 2 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03034 Car-Chr3 75354700 75356758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03034 1 133 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 83.459 5.33e-80 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03034 K02974 - han:110937429 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03034 03 75354700 75356758 Car03g03034 03 75354700 75356758 ECH
Car03g03034 03 75354700 75356758 Car04g00488 04 4983038 4985537 PCT