Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g03033 ATGGCTTCACAGCAACACGACACCGTTTTCCCCgaagaagatatcgacgaggatgaagaaggatttcacgaatacgaagaagaagaagaggaagacgacgaCGTTTTGGTTTTTGACGAAGAAAACGAGCCTTCTGCTACCGGTTCCGCTCTCGCCGTCACCGTTGCCGTTCCTGGTTCCTCCATCTCCAACGGAGGAGTCAGAGCTCCAATTTCAACGCCTACCACGACGATGATCGTTTTCGCTGATTCCTCCTCCTCCGATTCGAAACGGCAGCGATTGGAGCCAATTGAGGAGAAAAAACCTCCGCTGGAAGATTCGCGTAAGCTCTTTCAGCGTCTATGGACCGACGAAGATGAGATGGAACTGTTGCAAGGTTTCCTCGACTATACAACGCAGAGAGGATCCTCTCACCACAACGACACCGCTTTGTTCTACGACCAAATCAAGTCGAAGCTTCAACTCGATTTCAACAAGAACCAGCTCGTCGAGAAGATCCGAAGGTTGAAGAAGAAATACAGAAACGTTCTCAACAAAATCAGCTCCGGTAAGGAATTTTCCTTCAAAACCGCTCACGATCAAGCCACCTTCGAAATCTCTCGTAAGATCTGGAACAACGTAGCGCCGATCGCCGGAGAAATTGCCTTAGACGACGATGAAATCAACCTAAATCCAAGTCCGAAACCTAATCTCAATTTCAGTCCCGTAATTCTCAAGAGCGAAGCCATCTCGAACACGAGGAAGCGTTCACGGCCTCGATCCGGTATCAGAAGCTTCGAGAAGCGCGAATCGAATGATTCATCGATCAGAGATCGCGATTATATCAACCTCAACCATCCCAATCCTAATTTTATCGCTAATGCTAATTTTAAtgctaccacaacaacaaatactaccaccgctaatactgcatcaacaacacctattactactaatgctactgcaattaacgctaataacaataataataattgtagtagcagtgagaaAAACGTATCTGGATTGATTGAAGAGACGGTGAGGAGTTGTTTATCGCCGTTGTTGAAGGAATTGGTGTCCGGTGCGATGGGAGGACCGTTCGGAACGAGAGGAGGTTTCTCGATGAATCCATTTCCGTTGCAGTTGATGAATTTCGGTTTCGGAAGTGGAGAAGTGTTGGATGAAAAATGGAGGAAGCAACAGATTTTGGAGTTGGAAGTGTATTCAAAGAGGTTGGAGTTGGTGCAGGATCAGATTAAAGCTTCTCTTGACGAGTTGCGATCAATTGGTGGATTAGGAGGATGA 1284 0.405 MASQQHDTVFPEEDIDEDEEGFHEYEEEEEEDDDVLVFDEENEPSATGSALAVTVAVPGSSISNGGVRAPISTPTTTMIVFADSSSSDSKRQRLEPIEEKKPPLEDSRKLFQRLWTDEDEMELLQGFLDYTTQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKISSGKEFSFKTAHDQATFEISRKIWNNVAPIAGEIALDDDEINLNPSPKPNLNFSPVILKSEAISNTRKRSRPRSGIRSFEKRESNDSSIRDRDYINLNHPNPNFIANANFNATTTTNTTTANTASTTPITTNATAINANNNNNNCSSSEKNVSGLIEETVRSCLSPLLKELVSGAMGGPFGTRGGFSMNPFPLQLMNFGFGSGEVLDEKWRKQQILELEVYSKRLELVQDQIKASLDELRSIGGLGG 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g03033 427 MobiDBLite consensus disorder prediction 88 103 - -
Car03g03033 427 MobiDBLite consensus disorder prediction 83 103 - -
Car03g03033 427 PANTHER BNAANNG10740D PROTEIN 1 423 - -
Car03g03033 427 MobiDBLite consensus disorder prediction 244 275 - -
Car03g03033 427 Coils Coil 398 418 - -
Car03g03033 427 MobiDBLite consensus disorder prediction 1 33 - -
Car03g03033 427 Pfam Protein of unknown function, DUF573 111 205 IPR007592 GO:0006355
Car03g03033 427 Coils Coil 159 179 - -
Car03g03033 427 PANTHER BNAANNG10740D PROTEIN-RELATED 1 423 IPR007592 GO:0006355
Car03g03033 427 MobiDBLite consensus disorder prediction 256 273 - -
Car03g03033 427 MobiDBLite consensus disorder prediction 11 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g03033 Car-Chr3 75348074 75350193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g03033 1 422 GeBP Transcription Factor Family AT5G28040 39.832 9.95e-89 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Car03g03033 DUF573 1.7e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g03033 - - mtr:MTR_7g114600 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03033 03 75348074 75350193 Car04g00491 04 4990754 4991809 PCT