Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02995 ATGAAAAACAACACAATCAATAATTCCCAATTATTCCTCCTCCTAATCTTACCGGGAATAATTCTTCTCTCCGCCACAAAAGCCCAAGCCCAAAACAAGTCCAATGATTTCACAGATACAAATCCTAACGAATTCAACCCTTCCTTCGCTATAATCATAGTAATTTTAGTCGCTGCTCTTTTCCTCATGGGCTTTTTCTCCATCTACATCCGTCGCTGCGCCGATTCACCAACTTCTAACTTCGTTCTCCCCATCACCGACGGTAGATCGCGTAGGGCGGCGCGTGGACTCGATTCATCGGTCATCAATACTTTTCCGATTCTCGAATACTCTGAAGTTAAGATCCACAAAATTGGAAAAGAGATTTTGGAGTGTGCCGTTTGTTTATGCGAATTCGAAGACACCGAAACGCTGCGTTTGATTCCAAAGTGTGATCACGTTTTTCACCCTGAGTGCATCGACGAGTGGTTATCTTCTCACACAACTTGTCCCGTTTGTCGCGCGAATCTCGTTCCTCAATCCGGTGAGTCAACTCACGGAGTTCCCGAGTCTAACACCGAGTCGCAATTACAATCACAAAACGTTGAAGCTCAAAACGACGCCGTTGAAACACCGTCAGAACAGCTAGTAAACGCGGAATCTGACCCGGTCTTAGCTGTTCCGGAAGTGATTGCATTGGATAAAACGCTGAACCGAAACCGTACACGTGGTTCTAGATCGAACCGTCCGCGTCGTTTTCCACGATCGCATTCGACCGGACATTCGTTGGTCCAACCGGGTGAAAACACTGACCGGTTCACTTTGAAACTGCCTTTTGAAGTAAGGAAACAGATAATGAACCGGCAATTGGAAAGGGCGAGTAGTTTGATTACGTTACCAAGAGAAGGTAGTTCGAGGCAGGGTTACCGAACCGGAGGAGAGGGAAGTAGTAGAGGAAAAACTTCCAAGTTGTTGGACCGGGGTTTTAAATCAGACCGGTGGGTATTTAATAGAGCACCGTCGTTTTTAGCGAGAGCATTGTCAATTACATCAACAAAGCCAAAGGTGAATAGTAGCGACGATGAAGGGACTTCATCTGCCGCGGCTCCTATTATGCCTTCATCGGCGGTTGACTCTGCCCGCCCTCAGATCTGA 1134 0.4683 MKNNTINNSQLFLLLILPGIILLSATKAQAQNKSNDFTDTNPNEFNPSFAIIIVILVAALFLMGFFSIYIRRCADSPTSNFVLPITDGRSRRAARGLDSSVINTFPILEYSEVKIHKIGKEILECAVCLCEFEDTETLRLIPKCDHVFHPECIDEWLSSHTTCPVCRANLVPQSGESTHGVPESNTESQLQSQNVEAQNDAVETPSEQLVNAESDPVLAVPEVIALDKTLNRNRTRGSRSNRPRRFPRSHSTGHSLVQPGENTDRFTLKLPFEVRKQIMNRQLERASSLITLPREGSSRQGYRTGGEGSSRGKTSKLLDRGFKSDRWVFNRAPSFLARALSITSTKPKVNSSDDEGTSSAAAPIMPSSAVDSARPQI 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02995 377 MobiDBLite consensus disorder prediction 229 262 - -
Car03g02995 377 Pfam Ring finger domain 124 167 IPR001841 -
Car03g02995 377 MobiDBLite consensus disorder prediction 174 211 - -
Car03g02995 377 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 173 IPR013083 -
Car03g02995 377 SMART ring_2 125 166 IPR001841 -
Car03g02995 377 MobiDBLite consensus disorder prediction 293 311 - -
Car03g02995 377 MobiDBLite consensus disorder prediction 235 249 - -
Car03g02995 377 ProSiteProfiles Zinc finger RING-type profile. 125 167 IPR001841 -
Car03g02995 377 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 10 317 - -
Car03g02995 377 SUPERFAMILY RING/U-box 124 174 - -
Car03g02995 377 PANTHER RING FINGER DOMAIN-CONTAINING 10 317 - -
Car03g02995 377 MobiDBLite consensus disorder prediction 344 377 - -
Car03g02995 377 CDD RING-H2_EL5_like 124 167 - -
Car03g02995 377 MobiDBLite consensus disorder prediction 293 317 - -
Car03g02995 377 MobiDBLite consensus disorder prediction 174 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02995 Car-Chr3 75048598 75050304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02995 16 339 Rapid Response to Elicitors AT3G05200 47.337 3.57e-87 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02995 K10664 - gmx:100781706 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02995 03 75048598 75050304 Car03g02995 03 75048598 75050304 ECH
Car03g02995 03 75048598 75050304 Car04g00530 04 5366130 5368087 PCT