Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02991 ATGGCTTTCATTTCCATTCCCTCATTCTCTTTCAAAACAATTTCACTCTCACTAATCATCACACTCACTCTCCTCTTCTTCTTCTTCATCACAGCAACAAACCCCCCTTCGTCTCCCTCTTTCCAAACCACACCTCCTACAATTCGTAGATCACTCCTCACCATCACATCTTGCTCCTCCAACAAACCCCAATCAAATGGCATCATCAATTACCACTGCATTTTCCCTCAAAACCCTTACATCTCAATCACATCACTCTCTctcatcctcaccctccatttctacatcctcatcaacacagcacaacaccatttctctatcgtcactactaaactcgcttctcacctcaatctctcccctagtatggccgccgttactttactcgctctcggtaacggctctcccgatgtTTTCTCATCTTTAGCCGCTCTTCGCGCCGGTCAATACCGAACCGGCTTCGGCGCAATACTCTCTGCTGGTGCTTTCGTCTCGGCTCTCGTTGTCGGCTTCGTCGCGATCTACGCTGCTCCTTTTCCCGTTGATCCGGCGCCGTTTGTTAGAGATGTTTTGTTCTATTTAACCGCTGCGATGTTTCTTTTCTATGTTTATCTTAGTGCTGAGATTTTTCTATGGCAAGCCGTTGGATTCGTTGCGTTCTATATCTTCTTCGTTGCTTTGGTGTTCTACATGGATTTGGGAGTGGCGAATCGCAGGGAAAAGAGTTCTGCGGATCTCGAGGGACAAATTGAATCGTATAGCGAAGACAAAGCTTTGGGATCTATAGAAAAAGAGAAACACGCTTCTGGATTCAGTGGATCTTTTCGTTTGATTTCTAAAGCATGGGAGCTTCCTGTCTCAACTCTGTTAAGATTGACAATCCCTCAACCAGCACCGTCGCAATGGAGCAGATTTTATGCATCAGCCAATATTGCTCTTTGTCCACTTGCCCTCTTGTATGCATGCAACTCATTCATGGCTCTTGATCATCCCATAGTTTTTCTTCTCCCTAATACTCATTTCCCTCTCTGGTCAGTAGTGCTCATGGCAAGCTTCTCTCTTGCATTTCTTCATTTTGTAATTGAAAAAGAGCCCCCAAAAGCAGAGCATTTGCCTGTGGTGGTCATGGCATTTGTTATGAGCGTCTTTTGGATATCCACCACAGCTGGAGAGCTGGTGAATTGCCTCGAAGCTCTAGGTATACTTCTCAAACTTCCACCAGCATTCCTAGGTCTTACAGTTCTAGCATGGGGGAATTCGGTGGGGGATCTTGTTGCTGATGTTGCAGTTGCTAAAGCTGGTCATCCAGCAATGGCAATGGCTGGATGCTTTGCTGGACCGATGTTTAACATGCTTGTTGGTCTTGGAACTGCTTTGGTCATACAGACGACTAATATATATCCTAGAGCTTATGAACTTAATTTCCACGTTGGTATAGTGATTGCATTTGTATTCCTGATTTTAAGTCTCATGGGGTCTCTCTTGGTAATCACTTGGTCCCGATTCCGAGTCCCCAAGTTTTGGGGATTCTGTCTCGTAGGCCTCTATATTGCTTTTATGGCAGCGAGTTCGTTGGTAGCCGTCTTTTCAGGTTGA 1593 0.408 MAFISIPSFSFKTISLSLIITLTLLFFFFITATNPPSSPSFQTTPPTIRRSLLTITSCSSNKPQSNGIINYHCIFPQNPYISITSLSLILTLHFYILINTAQHHFSIVTTKLASHLNLSPSMAAVTLLALGNGSPDVFSSLAALRAGQYRTGFGAILSAGAFVSALVVGFVAIYAAPFPVDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAVGFVAFYIFFVALVFYMDLGVANRREKSSADLEGQIESYSEDKALGSIEKEKHASGFSGSFRLISKAWELPVSTLLRLTIPQPAPSQWSRFYASANIALCPLALLYACNSFMALDHPIVFLLPNTHFPLWSVVLMASFSLAFLHFVIEKEPPKAEHLPVVVMAFVMSVFWISTTAGELVNCLEALGILLKLPPAFLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGTALVIQTTNIYPRAYELNFHVGIVIAFVFLILSLMGSLLVITWSRFRVPKFWGFCLVGLYIAFMAASSLVAVFSG 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02991 530 Gene3D - 118 245 IPR044880 -
Car03g02991 530 Gene3D - 306 524 IPR044880 -
Car03g02991 530 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 274 529 - -
Car03g02991 530 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 63 242 - -
Car03g02991 530 Pfam Sodium/calcium exchanger protein 87 228 IPR004837 GO:0016021|GO:0055085
Car03g02991 530 Pfam Sodium/calcium exchanger protein 374 521 IPR004837 GO:0016021|GO:0055085
Car03g02991 530 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 274 529 - -
Car03g02991 530 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 63 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02991 Car-Chr3 75021230 75029294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02991 1 526 Antiporters AT1G08960 66.117 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02991 K13754 - gmx:100775437 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02991 03 75021230 75029294 Car03g02991 03 75021230 75029294 ECH