Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02989 ATGGTTCCTAAGCAAGCAAGTTCGATTCACACACACATTCGCATTTCTCTTTGTGTTGTTTTTGTTTCTGAGAGGTTCTCGGTGTTTGCAGAGGCAAGCCTCATCTTTGAGGGAAGAATGGATCATCAAGGGCATAACCAGAACCCGCCAATGGGGGTTGTCGGTAGCGGAGGTCAAATGACATATGGATCCAACCCGTATCAGCCAAACCAAATGACTGGGGCACCTGGATCGGTTGTTACATCAGTTGGGGGCATGCAATCTGCCGGtcaacctgctggagctcagctgggacagcatcaacttgcttatcagcacattcatcagcaacaacagcagcagcttcagcaacagctccaAGCCTTTTGGGCAAACCAGTACCAAGAAATCGAAAAGGTTACCGATTTCAAGAACCACAGCCTTCCCCTGGCAAGGATCAAGAAGATTATGAAGGCTGATGAGGATGTTAGAATGATATCGGCTGAAGCACCGGTCATTTTCGCAAGGGCCTGTGAGATGTTCATATTGGAGCTAACCCTGCGTTCCTGGAACCACACTGAAGAGAACAAAAGGAGGACACTTCAGAAGAATGACATTGCTGCAGCAATCACAAGGACTGATATCTTTGATTTCCTTGTCGACATTGTGCCTCGCGAGGACCTGAAAGACGAAGTGCTGACATCAATCCCTAGAGGAACAATGCCTGTCGGCGGGCCTGCTGATTCTCTTCCTTACTGCTACATGCCACCTCAGCATGCCCCCCAAGTTGGAACTGCTGGTGTTATAATGGGTAAGCCAGTGATGGACCCAAACATGTATGCTCAACAACCTCATCCCTACATGGCACCACAAATGTGGCCACAGCCTCCAGACCAGCGACCACCATCTCCAGATCATTAA 900 0.44 MVPKQASSIHTHIRISLCVVFVSERFSVFAEASLIFEGRMDHQGHNQNPPMGVVGSGGQMTYGSNPYQPNQMTGAPGSVVTSVGGMQSAGQPAGAQLGQHQLAYQHIHQQQQQQLQQQLQAFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGTMPVGGPADSLPYCYMPPQHAPQVGTAGVIMGKPVMDPNMYAQQPHPYMAPQMWPQPPDQRPPSPDH 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02989 299 Pfam Core histone H2A/H2B/H3/H4 106 203 IPR007125 GO:0003677
Car03g02989 299 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 40 299 - -
Car03g02989 299 MobiDBLite consensus disorder prediction 273 299 - -
Car03g02989 299 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 40 299 - -
Car03g02989 299 Gene3D Histone, subunit A 102 218 IPR009072 GO:0046982
Car03g02989 299 MobiDBLite consensus disorder prediction 282 299 - -
Car03g02989 299 SUPERFAMILY Histone-fold 108 212 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02989 Car-Chr3 75008736 75016111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02989 40 286 CCAAT-HAP5 Transcription Factor Family AT1G08970 62.500 1.72e-89 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Car03g02989 CBFD_NFYB_HMF 7.4e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02989 K08066 - gmx:100527803 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02989 03 75008736 75016111 Car03g02989 03 75008736 75016111 ECH
Car03g02989 03 75008736 75016111 Car04g00535 04 5409701 5411790 PCT