Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02953 ATGAGTCGAAGTGGTGCAGCTGGAGCCAAGGGAAAGAAGAAGGGTGCAACATTCACCATTGACTGTTCTAAGCCAGTGGAAGACAAGATCATGGACATTGCATCTCTTGAGAAGTTTCTTCAAGAGAGGATCAAAGTCGGTGGCAAAGCTGGTGCCCTTGGTGATTCTGTCACTGTTACCCGTGAGAAGAGCAAGATCACTGTTACCTCTGACAGTAACTTTTCCAAACGATATTTGAAGTATTTGACAAAGAAATACTTGAAGAAGCACAATGTTAGAGATTGGCTCAGAGTGATTGCTTCAAACAAAGATAGAAGTATCTATGAGCTGAGGTACTTCAACATTGCTGAGAACGAAGGAGAGGAAGAAGATTAA 375 0.424 MSRSGAAGAKGKKKGATFTIDCSKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02953 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
Car03g02953 124 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 124 - -
Car03g02953 124 Gene3D - 6 124 IPR038526 -
Car03g02953 124 PANTHER 60S RIBOSOMAL PROTEIN L22 1 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02953 Car-Chr3 74748948 74750479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02953 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 89.516 1.58e-69 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02953 K02891 - jre:109012705 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02953 03 74748948 74750479 Car03g02953 03 74748948 74750479 ECH
Car03g02953 03 74748948 74750479 Car04g00572 04 5744148 5746018 PCT