Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02950 ATGGGTATCGATCTTAAGGCTGGAGGTAAGAACAAAAAGACCAAACGAACATCACCTAAATCCAATGATATCTACCTCAAGCTTCTCGTCAAGCTGTATCGCTTCCTTGTTAGAAGGACCGACAGCAATTTCAATGCCGTGATACTCAAACGCTTGTTCATGAGCAAGGTCAACCGACCTCCACTCTCCTTGTCAAGATTGATTAAGTATATGCAGGGAAAGGAAGGTAAAATTGGTGTTGTTGTTGGTGCTGTAACCGATGATATTCGAGTATATGACGTTCCAGCAATAAAAGTTACTGCCCTCAGATTCACAGAGACAGCACGTGCAAGAATAGAAAAGGCTGGCGGTGAATGCTTAACATTTGATCAACTTGCTCTCAGGGCTCCCCTTGGACAGAACACGGTGAATATTATGTTTCTATACATATGTGACTTGTGA 441 0.4263 MGIDLKAGGKNKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKYMQGKEGKIGVVVGAVTDDIRVYDVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVNIMFLYICDL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02950 146 PANTHER 60S RIBOSOMAL PROTEIN L18-2-LIKE 1 139 - -
Car03g02950 146 Gene3D - 1 140 - -
Car03g02950 146 SUPERFAMILY Ribosomal proteins L15p and L18e 20 136 IPR036227 -
Car03g02950 146 Pfam Ribosomal protein 60S L18 and 50S L18e 2 136 IPR021131 -
Car03g02950 146 ProSitePatterns Ribosomal protein L18e signature. 50 67 IPR021132 GO:0003735|GO:0005840|GO:0006412
Car03g02950 146 PANTHER 60S RIBOSOMAL PROTEIN L18 1 139 IPR000039 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02950 Car-Chr3 74715093 74717456 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02950 3 136 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 76.296 1.24e-70 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02950 K02883 - gmx:100499789 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02950 03 74715093 74717456 Car04g00575 04 5762821 5764866 PCT