Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02946 ATGGGTATCGATCTTAAGGCTGGAGGTAAGAACAAAAAGACCAAACGAACATCACCTAAATCCAATGATATCTACCTCAAGCTTCTCGTCAAGCTGTATCGCTTCCTTGTTAGAAGGACCGACAGCAATTTCAATGCTGTGATACTCAAACGCTTTTTCATGAGCAAGGTCAACCGACCTCCACTTTCCTTGTCAAGATTGATTAAGTATATGCAGGGGAAGGTTTGTAAAATTGGGGTTGTTGTTGGTGCTGTAACCGATGATATCAGAGTATACCACGTCCCAGCAATTAAAGTTACTGCTCTCAGATTTACAGAGACAGCATGTCCAAGAATAGAAAAGGCTGGTGGTGAATGCTTAACATTTGATCAACTTGTTCTCAGGCCCCCCATTGGACAGAACACGGAATAA 411 0.4234 MGIDLKAGGKNKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRFFMSKVNRPPLSLSRLIKYMQGKVCKIGVVVGAVTDDIRVYHVPAIKVTALRFTETACPRIEKAGGECLTFDQLVLRPPIGQNTE 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02946 136 Pfam Ribosomal protein 60S L18 and 50S L18e 2 135 IPR021131 -
Car03g02946 136 Gene3D - 1 136 - -
Car03g02946 136 PANTHER 60S RIBOSOMAL PROTEIN L18-2-LIKE 1 135 - -
Car03g02946 136 PANTHER 60S RIBOSOMAL PROTEIN L18 1 135 IPR000039 GO:0003735|GO:0005840|GO:0006412
Car03g02946 136 SUPERFAMILY Ribosomal proteins L15p and L18e 20 135 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02946 Car-Chr3 74684675 74687393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02946 3 135 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 71.642 2.80e-63 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02946 K02883 - gmx:100499789 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02946 03 74684675 74687393 Car03g02946 03 74684675 74687393 ECH