Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02926 atgtcaaccgaacaatatttaccattctcggttgtttctgtcgttgaagatgttattcaacaacaacaacaacaacaacaaggtgtacggttgagcgaagtcaaatttgcttccagaaaagccgaagaaacttctttgagaaggtatgaagctgctggttggttgcgaaaaacggttggagttgttggagggaaagatttaccagctgaaccttctgaagaagatttcagaattggtttgcgtagtgggattattctctgcaatgctctcaacaaagttcaacctggagcagtggctaaggtggttgaaggcccttctgattctgttcttattcctgatggagcagcattgtctgcttttcaatacttcgaaaatgtaaggaattttcttgtagctgtggaagaaatggggcttcctacctttgaagcttctgatttggaacagggaggaaaatcttcaagaatagtgaattgtgttttggcaattaagtcctatgctgaagggaaacttggaggaagaagtggatcattcaaatttggtccaaaaccacctatttctgggaaaccaattttgaggaaaaactcagaaccattcatgaaatctttatggagtatgtccttattatgcgacaaagatggttacatgagtggtaacccttcatacAATGATCCTGGACATGATAGACCTGAAGGGGGTTCCTTAAATTCATTAGTTCGCCAATATTTGTGTGACAAGAAGCCCGAGGAAATTCCCATTgtagtggagtctcttcttaacaaagttatggaagagtttgagcgtcgcatgcaaactcaacaagaaacaTTTAAAACAACTCAAGAAGATAAGGCAGTGTCTGAAACCGAACAACCAATTTCAAAAGATGCTTCTGTTGATGATGGGATGGAAGAAAATGAAGATGGACAACAACAATTGCAAGACAAACAAGAGGAAGATGAAGATGGACAACAACAATTGCAAGACAAACAAGAGGAAGATGAAGATGGACAACAACACTTGCAAGACCAACAAGAGGAGTGCTATGATGAGGAATGCAATGGTGATGTTGAAAAATCAAGCAGCTTAAATTTGAAGCAGCAAAGTTTAGTACAACAACAAACTAAAAGTATCCAGGAAGTGAAAAATATTGTCCATCAAACGAAATCCGGGATGCAGTATCTGCAAAAGGAATATCAGAAGGATATGATCAACCTAAgtaagcacatgcatagtctagcttctgctgcttcgggatatcataaagttcttgaagaaaaccgcaagttatacaatcaagtgcaggatctgaaaggaaatattagagtgtactgtcgagttcgaccgttcttgggtgcacaaccaagtcaccctagcgttgtcagcagcgtggagggaggaagtttatcaatcatgatacctcccaattccaaattgggtaaagagggaaagaagacatttaacttcaataaagcgtttggttcttcttcaacacaagcggaggttttctcagatacacagcctctgattcgttctgttctcgacggttacaatgtctgtatatttgcatatggccagacaggatcaggaaaaacttacactatgtcaggaccagaccatcttgacgacgataccataggtgtgaactaccgtgcattgggagatcttttctttctctcagatcagaggaaagacaccattagctatgaaatctctgttcagatgcttgagatttacaatgagcaagtcagagacctactagctccagagggttctaccaaaagattagaaatccgcaatagttcccataatggcatcaacgtgccagacgcacaccttgttccagtttcaaccacttccgatgtcataacattgatgaacttgggacataagaatcgcgctgttggctctactgccatgaacgatcgtagcagtcgttctcacagctgtttgacagttcatattcaagggaagaacttgatatcaggaagcacaattcgaggtagtatgcatctcgttgaccttgcaggaagtgagagagcagataaaactgaggccactggagatagacttaaggaggctcaacatatcaacaagtcactttctgcattaggagatgtaattgcttcccttgcacagaagaatgcacatgttccatataggaacagcaaacttactcagctacttcaagatgcactcggagggcaggccaagaccctcatgtttgttcatattagtccggaacccgatgctcttggagaaacacttagtacacttaaattcgccgaacgagtctccactgttgaactcggagctgcgcgaatgaataaagataacacagaagtgaaagatcttaaagaacagattgctagtctgaaggcagccttagcaaggaaggatggagaagcagaacactttcaaccatctaccaatagTGGCCATGAATTGCCAAAGTTGAAATCCCATGCATCTTCACCTCCCATACAACGTAGTTTGACATCTTCTGGAGGCCGTAAGCAGCCAAAAGATGATTCTAGTAGCATGATGGGCCAGAAAAAGGGTGCATCAAAGCTGAAAAGAAGAAGCCTAGATCTTCATGACATGTATAGGCATTCACCGCCATGGCCACAAGTTAACAACAATAATGGAGTAAATGGAAAAGACGATGATAAAGAATCAGTTTCTGGTGAATGGGCTGGTAAGATTAGAATGAACAGGAATGACAGTTTAACTAGTGATGATAGCTTAGTTGGACAATGGGAAGCAGAAAGTAAACAGTTCTCTCCATTGCAAAGTCCAAGTTCTCTTTCAGAAAATTCAAAGTTAGGTTTGGAACCCGGGTTTGAAATTACCACAATGACCACAGATGAATCTGATGAACTTGAAATTGCAACCAGTGATTCTTCTGAATCAGACATGAATTGGTTAATACAGGCACCTAAACCAACCACACTTTCAAATGGATTAGGCTCTAAAGCAAAGAAAACTATTAATCCCAGAACAACAAAGATCCCAGAAGTCAGGAGTATGATTCCATCATTAATTCCAACTCCATCAAAGAAACAACCCACCCCAGTTATTCAATCAAGAAAGCTTCCAGGATCTATTGAAGTAAAGAGGAGGACTGGGAATGCAAAGTGA 3138 0.1485 MSTEQYLPFSVVSVVEDVIQQQQQQQQGVRLSEVKFASRKAEETSLRRYEAAGWLRKTVGVVGGKDLPAEPSEEDFRIGLRSGIILCNALNKVQPGAVAKVVEGPSDSVLIPDGAALSAFQYFENVRNFLVAVEEMGLPTFEASDLEQGGKSSRIVNCVLAIKSYAEGKLGGRSGSFKFGPKPPISGKPILRKNSEPFMKSLWSMSLLCDKDGYMSGNPSYNDPGHDRPEGGSLNSLVRQYLCDKKPEEIPIVVESLLNKVMEEFERRMQTQQETFKTTQEDKAVSETEQPISKDASVDDGMEENEDGQQQLQDKQEEDEDGQQQLQDKQEEDEDGQQHLQDQQEECYDEECNGDVEKSSSLNLKQQSLVQQQTKSIQEVKNIVHQTKSGMQYLQKEYQKDMINLSKHMHSLASAASGYHKVLEENRKLYNQVQDLKGNIRVYCRVRPFLGAQPSHPSVVSSVEGGSLSIMIPPNSKLGKEGKKTFNFNKAFGSSSTQAEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPDHLDDDTIGVNYRALGDLFFLSDQRKDTISYEISVQMLEIYNEQVRDLLAPEGSTKRLEIRNSSHNGINVPDAHLVPVSTTSDVITLMNLGHKNRAVGSTAMNDRSSRSHSCLTVHIQGKNLISGSTIRGSMHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVIASLAQKNAHVPYRNSKLTQLLQDALGGQAKTLMFVHISPEPDALGETLSTLKFAERVSTVELGAARMNKDNTEVKDLKEQIASLKAALARKDGEAEHFQPSTNSGHELPKLKSHASSPPIQRSLTSSGGRKQPKDDSSSMMGQKKGASKLKRRSLDLHDMYRHSPPWPQVNNNNGVNGKDDDKESVSGEWAGKIRMNRNDSLTSDDSLVGQWEAESKQFSPLQSPSSLSENSKLGLEPGFEITTMTTDESDELEIATSDSSESDMNWLIQAPKPTTLSNGLGSKAKKTINPRTTKIPEVRSMIPSLIPTPSKKQPTPVIQSRKLPGSIEVKRRTGNAK 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02926 1045 Pfam Calponin homology (CH) domain 48 166 IPR001715 GO:0005515
Car03g02926 1045 MobiDBLite consensus disorder prediction 1014 1028 - -
Car03g02926 1045 Gene3D Kinesin motor domain 378 769 IPR036961 -
Car03g02926 1045 MobiDBLite consensus disorder prediction 805 851 - -
Car03g02926 1045 ProSitePatterns Kinesin motor domain signature. 667 678 IPR019821 GO:0003777|GO:0005524|GO:0007018
Car03g02926 1045 MobiDBLite consensus disorder prediction 799 911 - -
Car03g02926 1045 MobiDBLite consensus disorder prediction 272 355 - -
Car03g02926 1045 MobiDBLite consensus disorder prediction 280 299 - -
Car03g02926 1045 Coils Coil 298 346 - -
Car03g02926 1045 ProSiteProfiles Kinesin motor domain profile. 439 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car03g02926 1045 Pfam Kinesin motor domain 467 766 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car03g02926 1045 Gene3D - 37 169 IPR036872 -
Car03g02926 1045 Coils Coil 774 801 - -
Car03g02926 1045 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 1026 - -
Car03g02926 1045 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 439 802 IPR027417 -
Car03g02926 1045 PANTHER KINESIN-LIKE PROTEIN KIN-14H 6 1026 - -
Car03g02926 1045 Coils Coil 419 439 - -
Car03g02926 1045 Coils Coil 262 282 - -
Car03g02926 1045 SUPERFAMILY Calponin-homology domain, CH-domain 48 170 IPR036872 -
Car03g02926 1045 ProSiteProfiles Calponin homology (CH) domain profile. 45 167 IPR001715 GO:0005515
Car03g02926 1045 PRINTS Kinesin heavy chain signature 515 536 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car03g02926 1045 PRINTS Kinesin heavy chain signature 637 654 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car03g02926 1045 PRINTS Kinesin heavy chain signature 668 686 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car03g02926 1045 PRINTS Kinesin heavy chain signature 717 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car03g02926 1045 MobiDBLite consensus disorder prediction 950 1045 - -
Car03g02926 1045 CDD KISc_C_terminal 437 769 - -
Car03g02926 1045 MobiDBLite consensus disorder prediction 966 997 - -
Car03g02926 1045 MobiDBLite consensus disorder prediction 308 346 - -
Car03g02926 1045 SMART ch_5 47 165 IPR001715 GO:0005515
Car03g02926 1045 SMART kinesin_4 437 775 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02926 Car-Chr3 74546336 74553614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02926 427 767 Calmodulin-binding Proteins AT5G65930 41.279 1.17e-75 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02926 K10406 - gmx:100799535 1383.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02926 03 74546336 74553614 Car03g02926 03 74546336 74553614 ECH