Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02921 ATGCGTTCAATATGGGTGAAGAAAAAGTCTGAAGTATTCTCAAACCATGAAGTCCCTAATTTTCCACGCGACAATGGTTGTGTTGACGAAATAATGAATGTCGATAATGGAATGGAAAAATATAAAGGCGTTCGAATGAGAGCATCCGGTAAATATGTTTCAGAAATTCGAAACCCACTTAAGGCTAAACGTGAATGGTTGGGAACTTTCGACACCGCTAAAGAGGCTTCAGATGCATATCAAGCTAAAAAACAGGAATTTGAAGCCATTATTAAGAGTAGGGGTCTATCTAATAGAAAGCCCAACAATGTTATTTATGTTGAAACTATGGTTACTAATTTAAATGACTCAAAGATTGATGCGTGGCAGCGTTCTTCGACTTCTTTGCCAGAATCAGTTACAAGCAATGAAACAATTACTTTGAAGGGTGAATTTATGGAACAAAATAGGCCCGATCTAAGTTATTTGGATGTGGTGAGGCAATCGGATGGGTTAAAGAATGAAGACTTTGCTTTGGCTAACTTTGGTGATGAAGAAGTTATTAGATGGATTGATGATGGTCTCAATGTATCGTGCCCATAA 582 0.3763 MRSIWVKKKSEVFSNHEVPNFPRDNGCVDEIMNVDNGMEKYKGVRMRASGKYVSEIRNPLKAKREWLGTFDTAKEASDAYQAKKQEFEAIIKSRGLSNRKPNNVIYVETMVTNLNDSKIDAWQRSSTSLPESVTSNETITLKGEFMEQNRPDLSYLDVVRQSDGLKNEDFALANFGDEEVIRWIDDGLNVSCP 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02921 193 CDD AP2 40 97 IPR001471 GO:0003700|GO:0006355
Car03g02921 193 ProSiteProfiles AP2/ERF domain profile. 40 100 IPR001471 GO:0003700|GO:0006355
Car03g02921 193 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 10 135 - -
Car03g02921 193 Pfam AP2 domain 40 88 IPR001471 GO:0003700|GO:0006355
Car03g02921 193 SUPERFAMILY DNA-binding domain 40 87 IPR016177 GO:0003677
Car03g02921 193 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
Car03g02921 193 Gene3D AP2/ERF domain 39 99 IPR036955 GO:0003700|GO:0006355
Car03g02921 193 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR-LIKE PROTEIN 10 135 - -
Car03g02921 193 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Car03g02921 193 PRINTS Ethylene responsive element binding protein signature 63 79 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02921 Car-Chr3 74475879 74477253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02921 39 91 AP2-EREBP Transcription Factor Family AT1G68550 58.491 4.31e-14 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Car03g02921 AP2 1.1e-06 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02921 - - cam:105851832 149.828