Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02917 ATGGTTTTTCACACCAATGACATATTGGATGTGTCAAATGATTTGAAAGACTATAAAGTTGTTTACTTGACAACCCTTGTGAGTATGGACAACGTCGAAAAGAATCGAATAATTGATCACTTGGATAAGCACATGACACCAGGAGCACTTCTTATGTTAAGGAGTGCTCCCGAAGCTCATACTTTTCTCTATCCAGTTGTTGAATATTATGATTTTCGAGACTTTGAAGTCATCTATGTGTTCCATCCTATAGACGAAGTTATCAACTCTGTTGTCATATAA 282 0.3617 MVFHTNDILDVSNDLKDYKVVYLTTLVSMDNVEKNRIIDHLDKHMTPGALLMLRSAPEAHTFLYPVVEYYDFRDFEVIYVFHPIDEVINSVVI 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02917 93 Gene3D Vaccinia Virus protein VP39 1 93 IPR029063 -
Car03g02917 93 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 93 IPR004298 GO:0030410|GO:0030418
Car03g02917 93 Pfam Nicotianamine synthase protein 1 93 IPR004298 GO:0030410|GO:0030418
Car03g02917 93 PANTHER NICOTIANAMINE SYNTHASE, S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 93 - -
Car03g02917 93 PANTHER NICOTIANAMINE SYNTHASE 3 1 93 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02917 Car-Chr3 74399739 74400952 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02917 1 93 Nicotianamine Synthase Gene Family AT1G56430 59.140 5.52e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02917 K05953 - cam:105851831 191.43