Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02912 ATGGCTAACACCAGCAACAATGTCGCTGGGGTTGACAACACATTCAGAAGAAAATTCGATCGTGAAGAGTATCTCGAACGAGCTCGGGAGCGTGAGAGACAGGAGGAAGAGGGTCGAGCAAAACCTAAAGCTAAAGGTCCTCCAGTGCAGAGGAAGCCCTTGAAACATAGAGATTATGAAGTAGACCTCGAATCCCGGTTGGGAAAGACTCAGGTTGTAACGCCGGTTGCACCACTAAGCCAACAGGCTGGATATTACTGCTCAGTTTGTGAGTGTGTGGTGAAGGACTCTGCAAACTACTTGGATCATATTAATGGAAAGAAACATCAAAGAGCGTTGGGCATGTCTATGCGAGCTGAACGTTCTTCTCTCAAACAGGTTCAGGAACGGTTTGAAAATCTTAAGAAACGTAAAGACCTTGGAAGCTTTACTGAGCAAGATTTTGACGAAAGGATTTTAAAACAGCAACAAGAAGAGGAAGAAAGAAAGCGACTGCGTCGGGAAAAGAAAAAAGAAAAGAAGAAGGAGGCTGTGGAAGAACCTGAAACCGATCCTGATGTTGCTGCCTTGATGGGGTTTGGTGGTTTCCGGTCATCAAACAAAAAGTGA 609 0.4516 MANTSNNVAGVDNTFRRKFDREEYLERARERERQEEEGRAKPKAKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRAERSSLKQVQERFENLKKRKDLGSFTEQDFDERILKQQQEEEERKRLRREKKKEKKKEAVEEPETDPDVAALMGFGGFRSSNKK 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02912 202 Coils Coil 153 180 - -
Car03g02912 202 MobiDBLite consensus disorder prediction 148 202 - -
Car03g02912 202 Pfam Zinc-finger of C2H2 type 85 109 - -
Car03g02912 202 Gene3D Classic Zinc Finger 79 118 - -
Car03g02912 202 SMART ZnF_U1_5 82 116 IPR003604 GO:0003676|GO:0008270
Car03g02912 202 MobiDBLite consensus disorder prediction 20 54 - -
Car03g02912 202 MobiDBLite consensus disorder prediction 20 44 - -
Car03g02912 202 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 7 201 IPR040107 GO:0000398|GO:0005681
Car03g02912 202 Coils Coil 117 137 - -
Car03g02912 202 MobiDBLite consensus disorder prediction 148 182 - -
Car03g02912 202 SUPERFAMILY beta-beta-alpha zinc fingers 80 124 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02912 4 147 C2H2 Transcription Factor Family AT3G05760 79.861 7.62e-83 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car03g02912 zf-C2H2_jaz 1.8e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02912 K12848 - gmx:100527057 312.768